Gene : Glyma.08G061100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  611
Name:  ? Glyma.08G061100 Secondary Identifier:  ? PAC:30539464
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G061100 0.5kb upstream 0.5kb upstream 2920 true Chr08: 4708031-4710950 Glycine max
Glyma.08G061100 0.5kb upstream 0.5kb upstream 500 false Chr08: 4708031-4708530 Glycine max
Glyma.08G061100 0.5kb downstream 0.5kb downstream 2920 true Chr08: 4708531-4711450 Glycine max
Glyma.08G061100 0.5kb downstream 0.5kb downstream 500 false Chr08: 4710951-4711450 Glycine max
Glyma.08G061100 1.0kb upstream 1.0kb upstream 3420 true Chr08: 4707531-4710950 Glycine max
Glyma.08G061100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4707531-4708530 Glycine max
Glyma.08G061100 1.0kb downstream 1.0kb downstream 3420 true Chr08: 4708531-4711950 Glycine max
Glyma.08G061100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4710951-4711950 Glycine max
Glyma.08G061100 2.0kb upstream 2.0kb upstream 4420 true Chr08: 4706531-4710950 Glycine max
Glyma.08G061100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4706531-4708530 Glycine max
Glyma.08G061100 2.0kb downstream 2.0kb downstream 4420 true Chr08: 4708531-4712950 Glycine max
Glyma.08G061100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4710951-4712950 Glycine max
Glyma.08G061100 5.0kb upstream 5.0kb upstream 7420 true Chr08: 4703531-4710950 Glycine max
Glyma.08G061100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4703531-4708530 Glycine max
Glyma.08G061100 5.0kb downstream 5.0kb downstream 7420 true Chr08: 4708531-4715950 Glycine max
Glyma.08G061100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4710951-4715950 Glycine max
Glyma.08G061100 10.0kb upstream 10.0kb upstream 12420 true Chr08: 4698531-4710950 Glycine max
Glyma.08G061100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4698531-4708530 Glycine max
Glyma.08G061100 10.0kb downstream 10.0kb downstream 12420 true Chr08: 4708531-4720950 Glycine max
Glyma.08G061100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4710951-4720950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305507 5265 Fabidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30419 0.0 7.54452    
cufflinks 2.30118 0.0 7.57652    
cufflinks 2.27365 0.0 7.54755    
cufflinks 3.49688 0.0 10.8439   High
cufflinks 1.54352 0.0 5.27075   Low
cufflinks 3.69287 0.0 11.2957   High
cufflinks 1.84505 0.0 6.19022    
cufflinks 1.84933 0.0 6.25589    
cufflinks 2.18153 0.0 7.19667    
cufflinks 1.791        
cufflinks 0.71        
cufflinks 1.718        
cufflinks 0.894        
cufflinks 0.496       Low
cufflinks 0.407       Low
cufflinks 1.949        
cufflinks 1.979       High
cufflinks 1.238        
cufflinks 1.704        
cufflinks 1.82        
cufflinks 0.662       Low
cufflinks 1.502        
cufflinks 1.64        
cufflinks 0.565       Low
cufflinks 1.835        
cufflinks 1.07        

0 Strain