Gene : Glyma.08G062300 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.4.1.19 - Phosphosulfolactate synthase / PSL synthase Genomic Order:  623
Name:  ? Glyma.08G062300 Secondary Identifier:  ? PAC:30537388
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G062300 0.5kb upstream 0.5kb upstream 3178 true Chr08: 4798709-4801886 Glycine max
Glyma.08G062300 0.5kb upstream 0.5kb upstream 500 false Chr08: 4801387-4801886 Glycine max
Glyma.08G062300 0.5kb downstream 0.5kb downstream 3178 true Chr08: 4798209-4801386 Glycine max
Glyma.08G062300 0.5kb downstream 0.5kb downstream 500 false Chr08: 4798209-4798708 Glycine max
Glyma.08G062300 1.0kb upstream 1.0kb upstream 3678 true Chr08: 4798709-4802386 Glycine max
Glyma.08G062300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4801387-4802386 Glycine max
Glyma.08G062300 1.0kb downstream 1.0kb downstream 3678 true Chr08: 4797709-4801386 Glycine max
Glyma.08G062300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4797709-4798708 Glycine max
Glyma.08G062300 2.0kb upstream 2.0kb upstream 4678 true Chr08: 4798709-4803386 Glycine max
Glyma.08G062300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4801387-4803386 Glycine max
Glyma.08G062300 2.0kb downstream 2.0kb downstream 4678 true Chr08: 4796709-4801386 Glycine max
Glyma.08G062300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4796709-4798708 Glycine max
Glyma.08G062300 5.0kb upstream 5.0kb upstream 7678 true Chr08: 4798709-4806386 Glycine max
Glyma.08G062300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4801387-4806386 Glycine max
Glyma.08G062300 5.0kb downstream 5.0kb downstream 7678 true Chr08: 4793709-4801386 Glycine max
Glyma.08G062300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4793709-4798708 Glycine max
Glyma.08G062300 10.0kb upstream 10.0kb upstream 12678 true Chr08: 4798709-4811386 Glycine max
Glyma.08G062300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4801387-4811386 Glycine max
Glyma.08G062300 10.0kb downstream 10.0kb downstream 12678 true Chr08: 4788709-4801386 Glycine max
Glyma.08G062300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4788709-4798708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312205 5265 Fabidae View MSA
124062504 5270 Rosid View MSA
123738734 5271 Pentapetalae View MSA
122789350 5272 Eudicot View MSA
122046426 5273 Angiosperm View MSA
121347124 5274 Embryophyte View MSA
123380496 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.45616 0.0 5.12205   Low
cufflinks 6.53196 0.0 19.0187    
cufflinks 13.3343 0.0 36.1721    
cufflinks 21.7096 0.0 57.956 High  
cufflinks 11.1263 0.0 30.6377    
cufflinks 7.16439 0.0 20.6204    
cufflinks 19.045 0.0 50.9808    
cufflinks 27.2472 0.0 72.7421 High  
cufflinks 23.2119 0.0 61.9351 High  
cufflinks 4.262        
cufflinks 3.462        
cufflinks 11.228     High High
cufflinks 2.598        
cufflinks 2.055        
cufflinks 3.747        
cufflinks 1.102        
cufflinks 3.495        
cufflinks 7.356     High High
cufflinks 2.596        
cufflinks 0.39       Low
cufflinks 1.871        
cufflinks 0.613       Low
cufflinks 0.427       Low
cufflinks 0.82        
cufflinks 0.67       Low
cufflinks 2.187        

0 Strain