Gene : Glyma.08G063600 G. max Wm82.a2.v1
Defline:  (1 of 7) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  636
Name:  ? Glyma.08G063600 Secondary Identifier:  ? PAC:30539112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G063600 0.5kb upstream 0.5kb upstream 4510 true Chr08: 4883287-4887796 Glycine max
Glyma.08G063600 0.5kb upstream 0.5kb upstream 500 false Chr08: 4887297-4887796 Glycine max
Glyma.08G063600 0.5kb downstream 0.5kb downstream 4510 true Chr08: 4882787-4887296 Glycine max
Glyma.08G063600 0.5kb downstream 0.5kb downstream 500 false Chr08: 4882787-4883286 Glycine max
Glyma.08G063600 1.0kb upstream 1.0kb upstream 5010 true Chr08: 4883287-4888296 Glycine max
Glyma.08G063600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4887297-4888296 Glycine max
Glyma.08G063600 1.0kb downstream 1.0kb downstream 5010 true Chr08: 4882287-4887296 Glycine max
Glyma.08G063600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4882287-4883286 Glycine max
Glyma.08G063600 2.0kb upstream 2.0kb upstream 6010 true Chr08: 4883287-4889296 Glycine max
Glyma.08G063600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4887297-4889296 Glycine max
Glyma.08G063600 2.0kb downstream 2.0kb downstream 6010 true Chr08: 4881287-4887296 Glycine max
Glyma.08G063600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4881287-4883286 Glycine max
Glyma.08G063600 5.0kb upstream 5.0kb upstream 9010 true Chr08: 4883287-4892296 Glycine max
Glyma.08G063600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4887297-4892296 Glycine max
Glyma.08G063600 5.0kb downstream 5.0kb downstream 9010 true Chr08: 4878287-4887296 Glycine max
Glyma.08G063600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4878287-4883286 Glycine max
Glyma.08G063600 10.0kb upstream 10.0kb upstream 14010 true Chr08: 4883287-4897296 Glycine max
Glyma.08G063600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4887297-4897296 Glycine max
Glyma.08G063600 10.0kb downstream 10.0kb downstream 14010 true Chr08: 4873287-4887296 Glycine max
Glyma.08G063600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4873287-4883286 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309412 5265 Fabidae View MSA
124069864 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75692 0.0 16.082    
cufflinks 6.13997 0.0 17.0206   High
cufflinks 6.48641 0.0 17.8449   High
cufflinks 4.92263 0.0 13.946    
cufflinks 2.52059 0.0 7.83184   Low
cufflinks 3.58743 0.0 10.58    
cufflinks 4.48334 0.0 12.8861    
cufflinks 3.71626 0.0 10.8983    
cufflinks 3.54108 0.0 10.4482    
cufflinks 1.272        
cufflinks 1.037       Low
cufflinks 3.55       High
cufflinks 1.21        
cufflinks 1.157        
cufflinks 1.198        
cufflinks 3.312        
cufflinks 0.873       Low
cufflinks 3.449        
cufflinks 3.005        
cufflinks 4.37       High
cufflinks 1.39        
cufflinks 3.632       High
cufflinks 2.906        
cufflinks 1.471        
cufflinks 3.52       High
cufflinks 0.952       Low

0 Strain