Gene : Glyma.08G064700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  647
Name:  ? Glyma.08G064700 Secondary Identifier:  ? PAC:30537731
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5188 Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G064700 0.5kb upstream 0.5kb upstream 3303 true Chr08: 4955840-4959142 Glycine max
Glyma.08G064700 0.5kb upstream 0.5kb upstream 500 false Chr08: 4955840-4956339 Glycine max
Glyma.08G064700 0.5kb downstream 0.5kb downstream 3303 true Chr08: 4956340-4959642 Glycine max
Glyma.08G064700 0.5kb downstream 0.5kb downstream 500 false Chr08: 4959143-4959642 Glycine max
Glyma.08G064700 1.0kb upstream 1.0kb upstream 3803 true Chr08: 4955340-4959142 Glycine max
Glyma.08G064700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4955340-4956339 Glycine max
Glyma.08G064700 1.0kb downstream 1.0kb downstream 3803 true Chr08: 4956340-4960142 Glycine max
Glyma.08G064700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4959143-4960142 Glycine max
Glyma.08G064700 2.0kb upstream 2.0kb upstream 4803 true Chr08: 4954340-4959142 Glycine max
Glyma.08G064700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4954340-4956339 Glycine max
Glyma.08G064700 2.0kb downstream 2.0kb downstream 4803 true Chr08: 4956340-4961142 Glycine max
Glyma.08G064700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4959143-4961142 Glycine max
Glyma.08G064700 5.0kb upstream 5.0kb upstream 7803 true Chr08: 4951340-4959142 Glycine max
Glyma.08G064700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4951340-4956339 Glycine max
Glyma.08G064700 5.0kb downstream 5.0kb downstream 7803 true Chr08: 4956340-4964142 Glycine max
Glyma.08G064700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4959143-4964142 Glycine max
Glyma.08G064700 10.0kb upstream 10.0kb upstream 12803 true Chr08: 4946340-4959142 Glycine max
Glyma.08G064700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4946340-4956339 Glycine max
Glyma.08G064700 10.0kb downstream 10.0kb downstream 12803 true Chr08: 4956340-4969142 Glycine max
Glyma.08G064700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4959143-4969142 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782240 5273 Angiosperm View MSA
122297559 5265 Fabidae View MSA
124075048 5270 Rosid View MSA
123752307 5271 Pentapetalae View MSA
122774475 5272 Eudicot View MSA
121053773 5274 Embryophyte View MSA
123093781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76533 0.0 13.555   High
cufflinks 1.10704 0.0 3.81455    
cufflinks 1.00592 0.0 3.49443    
cufflinks 1.02791 0.0 3.56578    
cufflinks 1.85773 0.0 5.99562    
cufflinks 4.82859 0.0 13.7041   High
cufflinks 0.903597 0.0 3.17168    
cufflinks 0.78845 0.0 2.79361    
cufflinks 1.57233 0.0 5.19128    
cufflinks 4.185        
cufflinks 17.421     High High
cufflinks 1.609        
cufflinks 6.041        
cufflinks 1.903        
cufflinks 3.898        
cufflinks 1.523        
cufflinks 37.576     High High
cufflinks 0.898       Low
cufflinks 1.513        
cufflinks 1.172        
cufflinks 12.653     High High
cufflinks 1.631        
cufflinks 2.145        
cufflinks 13.643     High High
cufflinks 1.175        
cufflinks 22.468     High High

0 Strain