Gene : Glyma.08G052800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  528
Name:  ? Glyma.08G052800 Secondary Identifier:  ? PAC:30535919
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G052800 0.5kb upstream 0.5kb upstream 1747 true Chr08: 4098426-4100172 Glycine max
Glyma.08G052800 0.5kb upstream 0.5kb upstream 500 false Chr08: 4098426-4098925 Glycine max
Glyma.08G052800 0.5kb downstream 0.5kb downstream 1747 true Chr08: 4098926-4100672 Glycine max
Glyma.08G052800 0.5kb downstream 0.5kb downstream 500 false Chr08: 4100173-4100672 Glycine max
Glyma.08G052800 1.0kb upstream 1.0kb upstream 2247 true Chr08: 4097926-4100172 Glycine max
Glyma.08G052800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4097926-4098925 Glycine max
Glyma.08G052800 1.0kb downstream 1.0kb downstream 2247 true Chr08: 4098926-4101172 Glycine max
Glyma.08G052800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4100173-4101172 Glycine max
Glyma.08G052800 2.0kb upstream 2.0kb upstream 3247 true Chr08: 4096926-4100172 Glycine max
Glyma.08G052800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4096926-4098925 Glycine max
Glyma.08G052800 2.0kb downstream 2.0kb downstream 3247 true Chr08: 4098926-4102172 Glycine max
Glyma.08G052800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4100173-4102172 Glycine max
Glyma.08G052800 5.0kb upstream 5.0kb upstream 6247 true Chr08: 4093926-4100172 Glycine max
Glyma.08G052800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4093926-4098925 Glycine max
Glyma.08G052800 5.0kb downstream 5.0kb downstream 6247 true Chr08: 4098926-4105172 Glycine max
Glyma.08G052800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4100173-4105172 Glycine max
Glyma.08G052800 10.0kb upstream 10.0kb upstream 11247 true Chr08: 4088926-4100172 Glycine max
Glyma.08G052800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4088926-4098925 Glycine max
Glyma.08G052800 10.0kb downstream 10.0kb downstream 11247 true Chr08: 4098926-4110172 Glycine max
Glyma.08G052800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4100173-4110172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122300132 5265 Fabidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.9406 0.0 115.643 High High
cufflinks 31.632 0.0 84.452 High  
cufflinks 10.6917 0.0 29.8351    
cufflinks 27.8254 0.0 74.2347 High  
cufflinks 1.6941 0.0 5.95225   Low
cufflinks 2.63315 0.0 8.85951    
cufflinks 13.7127 0.0 37.5179    
cufflinks 14.6567 0.0 39.8523    
cufflinks 0.601245 0.0 2.24856   Low
cufflinks 20.862     High  
cufflinks 0.474        
cufflinks 7.686     High  
cufflinks 0.08     Low Low
cufflinks 0.073       Low
cufflinks 0.119       Low
cufflinks 107.865     High High
cufflinks 0.221        
cufflinks 8.523     High  
cufflinks 15.728     High  
cufflinks 146.078     High High
cufflinks 0.402        
cufflinks 121.103     High High
cufflinks 73.267     High High
cufflinks 0.667        
cufflinks 117.826     High High
cufflinks 0.191        

0 Strain