Gene : Glyma.08G053000 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.3.99.5 - 3-oxo-5-alpha-steroid 4-dehydrogenase (acceptor) / Steroid 5-alpha-reductase Genomic Order:  530
Name:  ? Glyma.08G053000 Secondary Identifier:  ? PAC:30541440
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G053000 0.5kb upstream 0.5kb upstream 6404 true Chr08: 4107431-4113834 Glycine max
Glyma.08G053000 0.5kb upstream 0.5kb upstream 500 false Chr08: 4107431-4107930 Glycine max
Glyma.08G053000 0.5kb downstream 0.5kb downstream 6404 true Chr08: 4107931-4114334 Glycine max
Glyma.08G053000 0.5kb downstream 0.5kb downstream 500 false Chr08: 4113835-4114334 Glycine max
Glyma.08G053000 1.0kb upstream 1.0kb upstream 6904 true Chr08: 4106931-4113834 Glycine max
Glyma.08G053000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4106931-4107930 Glycine max
Glyma.08G053000 1.0kb downstream 1.0kb downstream 6904 true Chr08: 4107931-4114834 Glycine max
Glyma.08G053000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4113835-4114834 Glycine max
Glyma.08G053000 2.0kb upstream 2.0kb upstream 7904 true Chr08: 4105931-4113834 Glycine max
Glyma.08G053000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4105931-4107930 Glycine max
Glyma.08G053000 2.0kb downstream 2.0kb downstream 7904 true Chr08: 4107931-4115834 Glycine max
Glyma.08G053000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4113835-4115834 Glycine max
Glyma.08G053000 5.0kb upstream 5.0kb upstream 10904 true Chr08: 4102931-4113834 Glycine max
Glyma.08G053000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4102931-4107930 Glycine max
Glyma.08G053000 5.0kb downstream 5.0kb downstream 10904 true Chr08: 4107931-4118834 Glycine max
Glyma.08G053000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4113835-4118834 Glycine max
Glyma.08G053000 10.0kb upstream 10.0kb upstream 15904 true Chr08: 4097931-4113834 Glycine max
Glyma.08G053000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4097931-4107930 Glycine max
Glyma.08G053000 10.0kb downstream 10.0kb downstream 15904 true Chr08: 4107931-4123834 Glycine max
Glyma.08G053000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4113835-4123834 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302045 5265 Fabidae View MSA
124062787 5270 Rosid View MSA
123741182 5271 Pentapetalae View MSA
122795415 5272 Eudicot View MSA
122047658 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121351590 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7169 0.0 90.2744 High High
cufflinks 5.24108 0.0 15.8427    
cufflinks 14.8009 0.0 40.0779   High
cufflinks 3.08937 0.0 10.0649    
cufflinks 1.07472 0.0 3.88132    
cufflinks 0.74964 0.0 2.76223   Low
cufflinks 0.907252 0.0 3.31304    
cufflinks 2.80829 0.0 9.26938    
cufflinks 1.22627 0.0 4.38555    
cufflinks 0.861        
cufflinks 0.192        
cufflinks 2.568        
cufflinks 0.128       Low
cufflinks 0.017     Low Low
cufflinks 0.078       Low
cufflinks 4.866       High
cufflinks 0.641        
cufflinks 3.023        
cufflinks 1.683        
cufflinks 4.264        
cufflinks 0.285        
cufflinks 6.721       High
cufflinks 4.893       High
cufflinks 0.513        
cufflinks 5.302       High
cufflinks 0.375        

0 Strain