Gene : Glyma.08G053500 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Genomic Order:  535
Name:  ? Glyma.08G053500 Secondary Identifier:  ? PAC:30536879
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G053500 0.5kb upstream 0.5kb upstream 1834 true Chr08: 4137943-4139776 Glycine max
Glyma.08G053500 0.5kb upstream 0.5kb upstream 500 false Chr08: 4139277-4139776 Glycine max
Glyma.08G053500 0.5kb downstream 0.5kb downstream 1834 true Chr08: 4137443-4139276 Glycine max
Glyma.08G053500 0.5kb downstream 0.5kb downstream 500 false Chr08: 4137443-4137942 Glycine max
Glyma.08G053500 1.0kb upstream 1.0kb upstream 2334 true Chr08: 4137943-4140276 Glycine max
Glyma.08G053500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4139277-4140276 Glycine max
Glyma.08G053500 1.0kb downstream 1.0kb downstream 2334 true Chr08: 4136943-4139276 Glycine max
Glyma.08G053500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4136943-4137942 Glycine max
Glyma.08G053500 2.0kb upstream 2.0kb upstream 3334 true Chr08: 4137943-4141276 Glycine max
Glyma.08G053500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4139277-4141276 Glycine max
Glyma.08G053500 2.0kb downstream 2.0kb downstream 3334 true Chr08: 4135943-4139276 Glycine max
Glyma.08G053500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4135943-4137942 Glycine max
Glyma.08G053500 5.0kb upstream 5.0kb upstream 6334 true Chr08: 4137943-4144276 Glycine max
Glyma.08G053500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4139277-4144276 Glycine max
Glyma.08G053500 5.0kb downstream 5.0kb downstream 6334 true Chr08: 4132943-4139276 Glycine max
Glyma.08G053500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4132943-4137942 Glycine max
Glyma.08G053500 10.0kb upstream 10.0kb upstream 11334 true Chr08: 4137943-4149276 Glycine max
Glyma.08G053500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4139277-4149276 Glycine max
Glyma.08G053500 10.0kb downstream 10.0kb downstream 11334 true Chr08: 4127943-4139276 Glycine max
Glyma.08G053500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4127943-4137942 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309444 5265 Fabidae View MSA
124061812 5270 Rosid View MSA
123752217 5271 Pentapetalae View MSA
122794850 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.5411 0.0 207.115 High High
cufflinks 21.5752 0.0 83.3937 High  
cufflinks 48.0364 0.0 190.307 High High
cufflinks 8.33714 0.0 39.0375    
cufflinks 6.68276 0.0 28.7239    
cufflinks 15.439 0.0 55.0679    
cufflinks 0.840631 0.0 3.91796   Low
cufflinks 18.0091 0.0 70.7281    
cufflinks 4.5529 0.0 22.7003    
cufflinks 34.555     High High
cufflinks 13.053     High  
cufflinks 16.453     High  
cufflinks 5.135        
cufflinks 1.247       Low
cufflinks 4.218        
cufflinks 10.404     High  
cufflinks 107.692     High High
cufflinks 12.392     High  
cufflinks 2.871       Low
cufflinks 4.117        
cufflinks 9.414     High  
cufflinks 5.554        
cufflinks 14.989     High  
cufflinks 12.341     High  
cufflinks 4.238        
cufflinks 24.598     High  

0 Strain