Gene : Glyma.08G054800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14513 - PROTECTION OF TELOMERES 1 Genomic Order:  548
Name:  ? Glyma.08G054800 Secondary Identifier:  ? PAC:30535678
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G054800 0.5kb upstream 0.5kb upstream 6018 true Chr08: 4229035-4235052 Glycine max
Glyma.08G054800 0.5kb upstream 0.5kb upstream 500 false Chr08: 4229035-4229534 Glycine max
Glyma.08G054800 0.5kb downstream 0.5kb downstream 6018 true Chr08: 4229535-4235552 Glycine max
Glyma.08G054800 0.5kb downstream 0.5kb downstream 500 false Chr08: 4235053-4235552 Glycine max
Glyma.08G054800 1.0kb upstream 1.0kb upstream 6518 true Chr08: 4228535-4235052 Glycine max
Glyma.08G054800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4228535-4229534 Glycine max
Glyma.08G054800 1.0kb downstream 1.0kb downstream 6518 true Chr08: 4229535-4236052 Glycine max
Glyma.08G054800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4235053-4236052 Glycine max
Glyma.08G054800 2.0kb upstream 2.0kb upstream 7518 true Chr08: 4227535-4235052 Glycine max
Glyma.08G054800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4227535-4229534 Glycine max
Glyma.08G054800 2.0kb downstream 2.0kb downstream 7518 true Chr08: 4229535-4237052 Glycine max
Glyma.08G054800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4235053-4237052 Glycine max
Glyma.08G054800 5.0kb upstream 5.0kb upstream 10518 true Chr08: 4224535-4235052 Glycine max
Glyma.08G054800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4224535-4229534 Glycine max
Glyma.08G054800 5.0kb downstream 5.0kb downstream 10518 true Chr08: 4229535-4240052 Glycine max
Glyma.08G054800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4235053-4240052 Glycine max
Glyma.08G054800 10.0kb upstream 10.0kb upstream 15518 true Chr08: 4219535-4235052 Glycine max
Glyma.08G054800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4219535-4229534 Glycine max
Glyma.08G054800 10.0kb downstream 10.0kb downstream 15518 true Chr08: 4229535-4245052 Glycine max
Glyma.08G054800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4235053-4245052 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306488 5265 Fabidae View MSA
124064066 5270 Rosid View MSA
123742930 5271 Pentapetalae View MSA
122785922 5272 Eudicot View MSA
122044561 5273 Angiosperm View MSA
121346755 5274 Embryophyte View MSA
123426673 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.43993 0.0 16.6741    
cufflinks 4.23498 0.0 22.7236   High
cufflinks 2.21587 0.0 17.1079    
cufflinks 0.636618 0.0 5.67842   Low
cufflinks 1.62414 0.0 12.4314    
cufflinks 0.889907 0.0 5.14594    
cufflinks 0.481519 0.0 3.74571   Low
cufflinks 3.11944 0.0 20.707    
cufflinks 1.99208 0.0 13.1642    
cufflinks 0.191        
cufflinks 0.113        
cufflinks 0.236        
cufflinks 0.217        
cufflinks 0.259        
cufflinks 0.06       Low
cufflinks 0.256        
cufflinks 0.083       Low
cufflinks 0.205        
cufflinks 0.579       High
cufflinks 0.193        
cufflinks 0.063       Low
cufflinks 0.238        
cufflinks 0.252        
cufflinks 0.132        
cufflinks 0.172        
cufflinks 0.085       Low

0 Strain