Gene : Glyma.08G057500 G. max Wm82.a2.v1
Defline:  (1 of 3) PF08555 - Eukaryotic family of unknown function (DUF1754) (DUF1754) Genomic Order:  575
Name:  ? Glyma.08G057500 Secondary Identifier:  ? PAC:30539393
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G057500 0.5kb upstream 0.5kb upstream 1271 true Chr08: 4418516-4419786 Glycine max
Glyma.08G057500 0.5kb upstream 0.5kb upstream 500 false Chr08: 4418516-4419015 Glycine max
Glyma.08G057500 0.5kb downstream 0.5kb downstream 1271 true Chr08: 4419016-4420286 Glycine max
Glyma.08G057500 0.5kb downstream 0.5kb downstream 500 false Chr08: 4419787-4420286 Glycine max
Glyma.08G057500 1.0kb upstream 1.0kb upstream 1771 true Chr08: 4418016-4419786 Glycine max
Glyma.08G057500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4418016-4419015 Glycine max
Glyma.08G057500 1.0kb downstream 1.0kb downstream 1771 true Chr08: 4419016-4420786 Glycine max
Glyma.08G057500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4419787-4420786 Glycine max
Glyma.08G057500 2.0kb upstream 2.0kb upstream 2771 true Chr08: 4417016-4419786 Glycine max
Glyma.08G057500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4417016-4419015 Glycine max
Glyma.08G057500 2.0kb downstream 2.0kb downstream 2771 true Chr08: 4419016-4421786 Glycine max
Glyma.08G057500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4419787-4421786 Glycine max
Glyma.08G057500 5.0kb upstream 5.0kb upstream 5771 true Chr08: 4414016-4419786 Glycine max
Glyma.08G057500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4414016-4419015 Glycine max
Glyma.08G057500 5.0kb downstream 5.0kb downstream 5771 true Chr08: 4419016-4424786 Glycine max
Glyma.08G057500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4419787-4424786 Glycine max
Glyma.08G057500 10.0kb upstream 10.0kb upstream 10771 true Chr08: 4409016-4419786 Glycine max
Glyma.08G057500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4409016-4419015 Glycine max
Glyma.08G057500 10.0kb downstream 10.0kb downstream 10771 true Chr08: 4419016-4429786 Glycine max
Glyma.08G057500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4419787-4429786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304750 5265 Fabidae View MSA
124061519 5270 Rosid View MSA
123741482 5271 Pentapetalae View MSA
122792533 5272 Eudicot View MSA
122041645 5273 Angiosperm View MSA
121343821 5274 Embryophyte View MSA
123426521 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.4139 0.0 68.7557 High  
cufflinks 20.5549 0.0 56.4086 High  
cufflinks 19.5338 0.0 53.7513    
cufflinks 18.6318 0.0 51.4627   Low
cufflinks 25.046 0.0 67.7499 High  
cufflinks 31.067 0.0 83.3318 High High
cufflinks 17.4702 0.0 48.5314   Low
cufflinks 22.8807 0.0 62.1927 High  
cufflinks 25.2848 0.0 68.4527 High  
cufflinks 19.156     High  
cufflinks 17.552     High  
cufflinks 24.002     High  
cufflinks 29.861     High High
cufflinks 38.583     High High
cufflinks 18.017     High  
cufflinks 24.558     High  
cufflinks 11.83     High Low
cufflinks 21.136     High  
cufflinks 19.073     High  
cufflinks 21.718     High  
cufflinks 15.762     High Low
cufflinks 23.603     High  
cufflinks 23.234     High  
cufflinks 18.614     High  
cufflinks 23.886     High  
cufflinks 17.748     High  

0 Strain