Gene : Glyma.08G058400 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  584
Name:  ? Glyma.08G058400 Secondary Identifier:  ? PAC:30539708
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5129 Glycine max pathologic  
Gmax PWY-6483 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G058400 0.5kb upstream 0.5kb upstream 4652 true Chr08: 4472816-4477467 Glycine max
Glyma.08G058400 0.5kb upstream 0.5kb upstream 500 false Chr08: 4476968-4477467 Glycine max
Glyma.08G058400 0.5kb downstream 0.5kb downstream 4652 true Chr08: 4472316-4476967 Glycine max
Glyma.08G058400 0.5kb downstream 0.5kb downstream 500 false Chr08: 4472316-4472815 Glycine max
Glyma.08G058400 1.0kb upstream 1.0kb upstream 5152 true Chr08: 4472816-4477967 Glycine max
Glyma.08G058400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4476968-4477967 Glycine max
Glyma.08G058400 1.0kb downstream 1.0kb downstream 5152 true Chr08: 4471816-4476967 Glycine max
Glyma.08G058400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4471816-4472815 Glycine max
Glyma.08G058400 2.0kb upstream 2.0kb upstream 6152 true Chr08: 4472816-4478967 Glycine max
Glyma.08G058400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4476968-4478967 Glycine max
Glyma.08G058400 2.0kb downstream 2.0kb downstream 6152 true Chr08: 4470816-4476967 Glycine max
Glyma.08G058400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4470816-4472815 Glycine max
Glyma.08G058400 5.0kb upstream 5.0kb upstream 9152 true Chr08: 4472816-4481967 Glycine max
Glyma.08G058400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4476968-4481967 Glycine max
Glyma.08G058400 5.0kb downstream 5.0kb downstream 9152 true Chr08: 4467816-4476967 Glycine max
Glyma.08G058400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4467816-4472815 Glycine max
Glyma.08G058400 10.0kb upstream 10.0kb upstream 14152 true Chr08: 4472816-4486967 Glycine max
Glyma.08G058400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4476968-4486967 Glycine max
Glyma.08G058400 10.0kb downstream 10.0kb downstream 14152 true Chr08: 4462816-4476967 Glycine max
Glyma.08G058400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4462816-4472815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314274 5265 Fabidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.03606 0.0 23.1182    
cufflinks 0.264037 0.0 1.29296   Low
cufflinks 7.6621 0.0 27.812    
cufflinks 5.10944 0.0 20.3908    
cufflinks 3.9512 0.0 14.6454    
cufflinks 11.4253 0.0 39.282    
cufflinks 13.9689 0.0 47.623    
cufflinks 1.45399 0.0 7.48616    
cufflinks 6.81005 0.0 25.8991    
cufflinks 0.127       Low
cufflinks 10.832     High High
cufflinks 2.218        
cufflinks 1.66        
cufflinks 1.034        
cufflinks 9.415     High High
cufflinks 0.138       Low
cufflinks 2.574        
cufflinks 0.298        
cufflinks 0.135       Low
cufflinks 0.199        
cufflinks 8.35     High High
cufflinks 0.302        
cufflinks 0.123       Low
cufflinks 7.772     High High
cufflinks 0.166        
cufflinks 5.4       High

0 Strain