Gene : Glyma.08G045900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10350 - NUCLEAR PORE COMPLEX PROTEIN NUP155 Genomic Order:  459
Name:  ? Glyma.08G045900 Secondary Identifier:  ? PAC:30541436
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G045900 0.5kb upstream 0.5kb upstream 10330 true Chr08: 3619845-3630174 Glycine max
Glyma.08G045900 0.5kb upstream 0.5kb upstream 500 false Chr08: 3629675-3630174 Glycine max
Glyma.08G045900 0.5kb downstream 0.5kb downstream 10330 true Chr08: 3619345-3629674 Glycine max
Glyma.08G045900 0.5kb downstream 0.5kb downstream 500 false Chr08: 3619345-3619844 Glycine max
Glyma.08G045900 1.0kb upstream 1.0kb upstream 10830 true Chr08: 3619845-3630674 Glycine max
Glyma.08G045900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3629675-3630674 Glycine max
Glyma.08G045900 1.0kb downstream 1.0kb downstream 10830 true Chr08: 3618845-3629674 Glycine max
Glyma.08G045900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3618845-3619844 Glycine max
Glyma.08G045900 2.0kb upstream 2.0kb upstream 11830 true Chr08: 3619845-3631674 Glycine max
Glyma.08G045900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3629675-3631674 Glycine max
Glyma.08G045900 2.0kb downstream 2.0kb downstream 11830 true Chr08: 3617845-3629674 Glycine max
Glyma.08G045900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3617845-3619844 Glycine max
Glyma.08G045900 5.0kb upstream 5.0kb upstream 14830 true Chr08: 3619845-3634674 Glycine max
Glyma.08G045900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3629675-3634674 Glycine max
Glyma.08G045900 5.0kb downstream 5.0kb downstream 14830 true Chr08: 3614845-3629674 Glycine max
Glyma.08G045900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3614845-3619844 Glycine max
Glyma.08G045900 10.0kb upstream 10.0kb upstream 19830 true Chr08: 3619845-3639674 Glycine max
Glyma.08G045900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3629675-3639674 Glycine max
Glyma.08G045900 10.0kb downstream 10.0kb downstream 19830 true Chr08: 3609845-3629674 Glycine max
Glyma.08G045900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3609845-3619844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307236 5265 Fabidae View MSA
124061969 5270 Rosid View MSA
123736896 5271 Pentapetalae View MSA
122792710 5272 Eudicot View MSA
122046521 5273 Angiosperm View MSA
121344629 5274 Embryophyte View MSA
123428808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.61018 0.0 12.3506    
cufflinks 5.10416 0.0 13.6422    
cufflinks 2.92693 0.0 8.00669    
cufflinks 6.39506 0.0 17.0629    
cufflinks 4.62835 0.0 12.3996    
cufflinks 2.07977 0.0 5.87878   Low
cufflinks 8.50288 0.0 22.8048   High
cufflinks 3.60516 0.0 9.75682    
cufflinks 3.78358 0.0 10.2128    
cufflinks 2.206        
cufflinks 1.106       Low
cufflinks 2.403        
cufflinks 2.449        
cufflinks 3.093        
cufflinks 2.28        
cufflinks 3.779       High
cufflinks 1.131       Low
cufflinks 2.969        
cufflinks 4.471       High
cufflinks 3.171        
cufflinks 1.304       Low
cufflinks 3.635        
cufflinks 3.59        
cufflinks 1.227       Low
cufflinks 3.415        
cufflinks 1.324       Low

0 Strain