Gene : Glyma.08G047100 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  471
Name:  ? Glyma.08G047100 Secondary Identifier:  ? PAC:30536592
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5921 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G047100 0.5kb upstream 0.5kb upstream 6561 true Chr08: 3681070-3687630 Glycine max
Glyma.08G047100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3687131-3687630 Glycine max
Glyma.08G047100 0.5kb downstream 0.5kb downstream 6561 true Chr08: 3680570-3687130 Glycine max
Glyma.08G047100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3680570-3681069 Glycine max
Glyma.08G047100 1.0kb upstream 1.0kb upstream 7061 true Chr08: 3681070-3688130 Glycine max
Glyma.08G047100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3687131-3688130 Glycine max
Glyma.08G047100 1.0kb downstream 1.0kb downstream 7061 true Chr08: 3680070-3687130 Glycine max
Glyma.08G047100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3680070-3681069 Glycine max
Glyma.08G047100 2.0kb upstream 2.0kb upstream 8061 true Chr08: 3681070-3689130 Glycine max
Glyma.08G047100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3687131-3689130 Glycine max
Glyma.08G047100 2.0kb downstream 2.0kb downstream 8061 true Chr08: 3679070-3687130 Glycine max
Glyma.08G047100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3679070-3681069 Glycine max
Glyma.08G047100 5.0kb upstream 5.0kb upstream 11061 true Chr08: 3681070-3692130 Glycine max
Glyma.08G047100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3687131-3692130 Glycine max
Glyma.08G047100 5.0kb downstream 5.0kb downstream 11061 true Chr08: 3676070-3687130 Glycine max
Glyma.08G047100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3676070-3681069 Glycine max
Glyma.08G047100 10.0kb upstream 10.0kb upstream 16061 true Chr08: 3681070-3697130 Glycine max
Glyma.08G047100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3687131-3697130 Glycine max
Glyma.08G047100 10.0kb downstream 10.0kb downstream 16061 true Chr08: 3671070-3687130 Glycine max
Glyma.08G047100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3671070-3681069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304937 5265 Fabidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.67338 0.0 24.3242    
cufflinks 7.98293 0.0 33.7878    
cufflinks 2.92454 0.0 10.9544   Low
cufflinks 6.94573 0.0 21.4987    
cufflinks 6.765 0.0 24.7872    
cufflinks 2.50037 0.0 12.7177   Low
cufflinks 11.0308 0.0 44.9866   High
cufflinks 3.76631 0.0 15.5196    
cufflinks 3.58248 0.0 12.9235    
cufflinks 0.826        
cufflinks 0.106       Low
cufflinks 0.637        
cufflinks 0.92        
cufflinks 1.277        
cufflinks 0.164       Low
cufflinks 2.658       High
cufflinks 0.122       Low
cufflinks 0.877        
cufflinks 1.25        
cufflinks 2.963       High
cufflinks 0.126       Low
cufflinks 2.368       High
cufflinks 2.123        
cufflinks 0.078       Low
cufflinks 2.89       High
cufflinks 0.242        

0 Strain