Gene : Glyma.08G047200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  472
Name:  ? Glyma.08G047200 Secondary Identifier:  ? PAC:30539399
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G047200 0.5kb upstream 0.5kb upstream 3708 true Chr08: 3689490-3693197 Glycine max
Glyma.08G047200 0.5kb upstream 0.5kb upstream 500 false Chr08: 3692698-3693197 Glycine max
Glyma.08G047200 0.5kb downstream 0.5kb downstream 3708 true Chr08: 3688990-3692697 Glycine max
Glyma.08G047200 0.5kb downstream 0.5kb downstream 500 false Chr08: 3688990-3689489 Glycine max
Glyma.08G047200 1.0kb upstream 1.0kb upstream 4208 true Chr08: 3689490-3693697 Glycine max
Glyma.08G047200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3692698-3693697 Glycine max
Glyma.08G047200 1.0kb downstream 1.0kb downstream 4208 true Chr08: 3688490-3692697 Glycine max
Glyma.08G047200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3688490-3689489 Glycine max
Glyma.08G047200 2.0kb upstream 2.0kb upstream 5208 true Chr08: 3689490-3694697 Glycine max
Glyma.08G047200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3692698-3694697 Glycine max
Glyma.08G047200 2.0kb downstream 2.0kb downstream 5208 true Chr08: 3687490-3692697 Glycine max
Glyma.08G047200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3687490-3689489 Glycine max
Glyma.08G047200 5.0kb upstream 5.0kb upstream 8208 true Chr08: 3689490-3697697 Glycine max
Glyma.08G047200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3692698-3697697 Glycine max
Glyma.08G047200 5.0kb downstream 5.0kb downstream 8208 true Chr08: 3684490-3692697 Glycine max
Glyma.08G047200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3684490-3689489 Glycine max
Glyma.08G047200 10.0kb upstream 10.0kb upstream 13208 true Chr08: 3689490-3702697 Glycine max
Glyma.08G047200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3692698-3702697 Glycine max
Glyma.08G047200 10.0kb downstream 10.0kb downstream 13208 true Chr08: 3679490-3692697 Glycine max
Glyma.08G047200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3679490-3689489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300994 5265 Fabidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.628 0.0 189.935 High  
cufflinks 29.8272 0.0 100.402 High  
cufflinks 58.4833 0.0 180.037 High  
cufflinks 105.197 0.0 407.327 High  
cufflinks 44.7039 0.0 133.616 High  
cufflinks 312.42 0.0 1519.52 High High
cufflinks 25.0485 0.0 88.0975 High Low
cufflinks 38.9245 0.0 130.419 High  
cufflinks 50.7676 0.0 176.918 High  
cufflinks 3.726        
cufflinks 2.841        
cufflinks 6.442       High
cufflinks 8.476     High High
cufflinks 4.909        
cufflinks 1.503       Low
cufflinks 2.93        
cufflinks 3.859        
cufflinks 5.077        
cufflinks 3.437        
cufflinks 2.751        
cufflinks 3.574        
cufflinks 3.292        
cufflinks 2.257       Low
cufflinks 3.746        
cufflinks 3.122        
cufflinks 3.504        

0 Strain