Gene : Glyma.08G047300 G. max Wm82.a2.v1
Defline:  (1 of 20) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  473
Name:  ? Glyma.08G047300 Secondary Identifier:  ? PAC:30536975
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G047300 0.5kb upstream 0.5kb upstream 8102 true Chr08: 3694731-3702832 Glycine max
Glyma.08G047300 0.5kb upstream 0.5kb upstream 500 false Chr08: 3702333-3702832 Glycine max
Glyma.08G047300 0.5kb downstream 0.5kb downstream 8102 true Chr08: 3694231-3702332 Glycine max
Glyma.08G047300 0.5kb downstream 0.5kb downstream 500 false Chr08: 3694231-3694730 Glycine max
Glyma.08G047300 1.0kb upstream 1.0kb upstream 8602 true Chr08: 3694731-3703332 Glycine max
Glyma.08G047300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3702333-3703332 Glycine max
Glyma.08G047300 1.0kb downstream 1.0kb downstream 8602 true Chr08: 3693731-3702332 Glycine max
Glyma.08G047300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3693731-3694730 Glycine max
Glyma.08G047300 2.0kb upstream 2.0kb upstream 9602 true Chr08: 3694731-3704332 Glycine max
Glyma.08G047300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3702333-3704332 Glycine max
Glyma.08G047300 2.0kb downstream 2.0kb downstream 9602 true Chr08: 3692731-3702332 Glycine max
Glyma.08G047300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3692731-3694730 Glycine max
Glyma.08G047300 5.0kb upstream 5.0kb upstream 12602 true Chr08: 3694731-3707332 Glycine max
Glyma.08G047300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3702333-3707332 Glycine max
Glyma.08G047300 5.0kb downstream 5.0kb downstream 12602 true Chr08: 3689731-3702332 Glycine max
Glyma.08G047300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3689731-3694730 Glycine max
Glyma.08G047300 10.0kb upstream 10.0kb upstream 17602 true Chr08: 3694731-3712332 Glycine max
Glyma.08G047300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3702333-3712332 Glycine max
Glyma.08G047300 10.0kb downstream 10.0kb downstream 17602 true Chr08: 3684731-3702332 Glycine max
Glyma.08G047300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3684731-3694730 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303456 5265 Fabidae View MSA
124070099 5270 Rosid View MSA
123749357 5271 Pentapetalae View MSA
122797493 5272 Eudicot View MSA
122048328 5273 Angiosperm View MSA
121310931 5274 Embryophyte View MSA
123348303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.027 0.0 37.438   High
cufflinks 5.75779 0.0 16.1206    
cufflinks 5.11519 0.0 14.4714    
cufflinks 9.21606 0.0 24.8997    
cufflinks 3.2032 0.0 9.63892    
cufflinks 16.8289 0.0 44.9202   High
cufflinks 1.81288 0.0 5.91089   Low
cufflinks 4.65049 0.0 13.3018    
cufflinks 3.7838 0.0 11.115    
cufflinks 1.918       Low
cufflinks 15.224     High High
cufflinks 1.943       Low
cufflinks 1.991       Low
cufflinks 1.236       Low
cufflinks 10.167     High High
cufflinks 8.08     High  
cufflinks 1.335       Low
cufflinks 3.279        
cufflinks 2.557        
cufflinks 7.435     High  
cufflinks 13.555     High High
cufflinks 7.715     High  
cufflinks 5.067        
cufflinks 8.325     High  
cufflinks 7.071     High  
cufflinks 4.6        

0 Strain