Gene : Glyma.08G047500 G. max Wm82.a2.v1
Defline:  (1 of 20) KOG4473 - Uncharacterized membrane protein Genomic Order:  475
Name:  ? Glyma.08G047500 Secondary Identifier:  ? PAC:30539560
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G047500 0.5kb upstream 0.5kb upstream 2842 true Chr08: 3715090-3717931 Glycine max
Glyma.08G047500 0.5kb upstream 0.5kb upstream 500 false Chr08: 3717432-3717931 Glycine max
Glyma.08G047500 0.5kb downstream 0.5kb downstream 2842 true Chr08: 3714590-3717431 Glycine max
Glyma.08G047500 0.5kb downstream 0.5kb downstream 500 false Chr08: 3714590-3715089 Glycine max
Glyma.08G047500 1.0kb upstream 1.0kb upstream 3342 true Chr08: 3715090-3718431 Glycine max
Glyma.08G047500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3717432-3718431 Glycine max
Glyma.08G047500 1.0kb downstream 1.0kb downstream 3342 true Chr08: 3714090-3717431 Glycine max
Glyma.08G047500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3714090-3715089 Glycine max
Glyma.08G047500 2.0kb upstream 2.0kb upstream 4342 true Chr08: 3715090-3719431 Glycine max
Glyma.08G047500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3717432-3719431 Glycine max
Glyma.08G047500 2.0kb downstream 2.0kb downstream 4342 true Chr08: 3713090-3717431 Glycine max
Glyma.08G047500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3713090-3715089 Glycine max
Glyma.08G047500 5.0kb upstream 5.0kb upstream 7342 true Chr08: 3715090-3722431 Glycine max
Glyma.08G047500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3717432-3722431 Glycine max
Glyma.08G047500 5.0kb downstream 5.0kb downstream 7342 true Chr08: 3710090-3717431 Glycine max
Glyma.08G047500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3710090-3715089 Glycine max
Glyma.08G047500 10.0kb upstream 10.0kb upstream 12342 true Chr08: 3715090-3727431 Glycine max
Glyma.08G047500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3717432-3727431 Glycine max
Glyma.08G047500 10.0kb downstream 10.0kb downstream 12342 true Chr08: 3705090-3717431 Glycine max
Glyma.08G047500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3705090-3715089 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304992 5265 Fabidae View MSA
124062648 5270 Rosid View MSA
123736960 5271 Pentapetalae View MSA
122790117 5272 Eudicot View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.01518 0.0 7.08178    
cufflinks 9.77988 0.0 28.2442   High
cufflinks 1.27027 0.0 4.62464   Low
cufflinks 3.74511 0.0 12.3264    
cufflinks 6.65357 0.0 20.0529    
cufflinks 1.50933 0.0 5.41383   Low
cufflinks 4.14535 0.0 13.4069    
cufflinks 10.2954 0.0 29.4708   High
cufflinks 5.29995 0.0 16.5663    
cufflinks 1.502        
cufflinks 0.23       Low
cufflinks 1.437        
cufflinks 1.98        
cufflinks 2.939        
cufflinks 0.545       Low
cufflinks 2.586        
cufflinks 1.265        
cufflinks 3.382        
cufflinks 5.152       High
cufflinks 2.698        
cufflinks 0.491       Low
cufflinks 3.004        
cufflinks 3.796       High
cufflinks 0.414       Low
cufflinks 2.554        
cufflinks 0.605        

0 Strain