Gene : Glyma.08G048100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10802 - MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 Genomic Order:  481
Name:  ? Glyma.08G048100 Secondary Identifier:  ? PAC:30538674
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G048100 0.5kb upstream 0.5kb upstream 6618 true Chr08: 3748084-3754701 Glycine max
Glyma.08G048100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3754202-3754701 Glycine max
Glyma.08G048100 0.5kb downstream 0.5kb downstream 6618 true Chr08: 3747584-3754201 Glycine max
Glyma.08G048100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3747584-3748083 Glycine max
Glyma.08G048100 1.0kb upstream 1.0kb upstream 7118 true Chr08: 3748084-3755201 Glycine max
Glyma.08G048100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3754202-3755201 Glycine max
Glyma.08G048100 1.0kb downstream 1.0kb downstream 7118 true Chr08: 3747084-3754201 Glycine max
Glyma.08G048100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3747084-3748083 Glycine max
Glyma.08G048100 2.0kb upstream 2.0kb upstream 8118 true Chr08: 3748084-3756201 Glycine max
Glyma.08G048100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3754202-3756201 Glycine max
Glyma.08G048100 2.0kb downstream 2.0kb downstream 8118 true Chr08: 3746084-3754201 Glycine max
Glyma.08G048100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3746084-3748083 Glycine max
Glyma.08G048100 5.0kb upstream 5.0kb upstream 11118 true Chr08: 3748084-3759201 Glycine max
Glyma.08G048100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3754202-3759201 Glycine max
Glyma.08G048100 5.0kb downstream 5.0kb downstream 11118 true Chr08: 3743084-3754201 Glycine max
Glyma.08G048100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3743084-3748083 Glycine max
Glyma.08G048100 10.0kb upstream 10.0kb upstream 16118 true Chr08: 3748084-3764201 Glycine max
Glyma.08G048100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3754202-3764201 Glycine max
Glyma.08G048100 10.0kb downstream 10.0kb downstream 16118 true Chr08: 3738084-3754201 Glycine max
Glyma.08G048100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3738084-3748083 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307905 5265 Fabidae View MSA
124062274 5270 Rosid View MSA
123746646 5271 Pentapetalae View MSA
122793036 5272 Eudicot View MSA
122044875 5273 Angiosperm View MSA
121346968 5274 Embryophyte View MSA
123428868 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1131 0.0 56.3615    
cufflinks 24.1015 0.0 64.3032 High  
cufflinks 8.41194 0.0 23.6173   Low
cufflinks 18.6463 0.0 49.8632    
cufflinks 40.9247 0.0 111.039 High High
cufflinks 25.5702 0.0 68.2647 High  
cufflinks 29.0961 0.0 77.8009 High  
cufflinks 24.0333 0.0 64.1212 High  
cufflinks 26.3226 0.0 70.2852 High  
cufflinks 3.812        
cufflinks 0.668       Low
cufflinks 2.947        
cufflinks 10.768     High High
cufflinks 14.606     High High
cufflinks 2.106        
cufflinks 3.092        
cufflinks 2.324        
cufflinks 3.241        
cufflinks 5.211        
cufflinks 2.151        
cufflinks 1.114       Low
cufflinks 2.316        
cufflinks 3.789        
cufflinks 0.889       Low
cufflinks 2.52        
cufflinks 2.058        

0 Strain