Gene : Glyma.08G048200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21569//PTHR21569:SF6 - RIBOSOMAL PROTEIN S9 Genomic Order:  482
Name:  ? Glyma.08G048200 Secondary Identifier:  ? PAC:30540560
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G048200 0.5kb upstream 0.5kb upstream 1872 true Chr08: 3758072-3759943 Glycine max
Glyma.08G048200 0.5kb upstream 0.5kb upstream 500 false Chr08: 3759444-3759943 Glycine max
Glyma.08G048200 0.5kb downstream 0.5kb downstream 1872 true Chr08: 3757572-3759443 Glycine max
Glyma.08G048200 0.5kb downstream 0.5kb downstream 500 false Chr08: 3757572-3758071 Glycine max
Glyma.08G048200 1.0kb upstream 1.0kb upstream 2372 true Chr08: 3758072-3760443 Glycine max
Glyma.08G048200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3759444-3760443 Glycine max
Glyma.08G048200 1.0kb downstream 1.0kb downstream 2372 true Chr08: 3757072-3759443 Glycine max
Glyma.08G048200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3757072-3758071 Glycine max
Glyma.08G048200 2.0kb upstream 2.0kb upstream 3372 true Chr08: 3758072-3761443 Glycine max
Glyma.08G048200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3759444-3761443 Glycine max
Glyma.08G048200 2.0kb downstream 2.0kb downstream 3372 true Chr08: 3756072-3759443 Glycine max
Glyma.08G048200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3756072-3758071 Glycine max
Glyma.08G048200 5.0kb upstream 5.0kb upstream 6372 true Chr08: 3758072-3764443 Glycine max
Glyma.08G048200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3759444-3764443 Glycine max
Glyma.08G048200 5.0kb downstream 5.0kb downstream 6372 true Chr08: 3753072-3759443 Glycine max
Glyma.08G048200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3753072-3758071 Glycine max
Glyma.08G048200 10.0kb upstream 10.0kb upstream 11372 true Chr08: 3758072-3769443 Glycine max
Glyma.08G048200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3759444-3769443 Glycine max
Glyma.08G048200 10.0kb downstream 10.0kb downstream 11372 true Chr08: 3748072-3759443 Glycine max
Glyma.08G048200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3748072-3758071 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303665 5265 Fabidae View MSA
124069246 5270 Rosid View MSA
123741428 5271 Pentapetalae View MSA
122794496 5272 Eudicot View MSA
122042530 5273 Angiosperm View MSA
121347858 5274 Embryophyte View MSA
123423904 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.4876 0.0 132.08 High  
cufflinks 45.4682 0.0 123.259 High  
cufflinks 16.0711 0.0 43.4135   Low
cufflinks 25.3855 0.0 67.7295 High Low
cufflinks 75.6923 0.0 216.228 High High
cufflinks 53.6757 0.0 147.634 High  
cufflinks 66.8042 0.0 187.366 High  
cufflinks 40.4463 0.0 109.041 High  
cufflinks 40.6172 0.0 109.614 High  
cufflinks 27.946     High  
cufflinks 4.575       Low
cufflinks 16.407     High  
cufflinks 54.322     High High
cufflinks 76.489     High High
cufflinks 3.422       Low
cufflinks 24.306     High  
cufflinks 15.639     High  
cufflinks 16.603     High  
cufflinks 30.18     High  
cufflinks 15.665     High  
cufflinks 6.097     High Low
cufflinks 18.422     High  
cufflinks 29.849     High  
cufflinks 6.287     High Low
cufflinks 19.519     High  
cufflinks 11.025     High  

0 Strain