Gene : Glyma.08G049200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31029:SF4 - F5O11.6 Genomic Order:  492
Name:  ? Glyma.08G049200 Secondary Identifier:  ? PAC:30537766
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G049200 0.5kb upstream 0.5kb upstream 7020 true Chr08: 3836003-3843022 Glycine max
Glyma.08G049200 0.5kb upstream 0.5kb upstream 500 false Chr08: 3842523-3843022 Glycine max
Glyma.08G049200 0.5kb downstream 0.5kb downstream 7020 true Chr08: 3835503-3842522 Glycine max
Glyma.08G049200 0.5kb downstream 0.5kb downstream 500 false Chr08: 3835503-3836002 Glycine max
Glyma.08G049200 1.0kb upstream 1.0kb upstream 7520 true Chr08: 3836003-3843522 Glycine max
Glyma.08G049200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3842523-3843522 Glycine max
Glyma.08G049200 1.0kb downstream 1.0kb downstream 7520 true Chr08: 3835003-3842522 Glycine max
Glyma.08G049200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3835003-3836002 Glycine max
Glyma.08G049200 2.0kb upstream 2.0kb upstream 8520 true Chr08: 3836003-3844522 Glycine max
Glyma.08G049200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3842523-3844522 Glycine max
Glyma.08G049200 2.0kb downstream 2.0kb downstream 8520 true Chr08: 3834003-3842522 Glycine max
Glyma.08G049200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3834003-3836002 Glycine max
Glyma.08G049200 5.0kb upstream 5.0kb upstream 11520 true Chr08: 3836003-3847522 Glycine max
Glyma.08G049200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3842523-3847522 Glycine max
Glyma.08G049200 5.0kb downstream 5.0kb downstream 11520 true Chr08: 3831003-3842522 Glycine max
Glyma.08G049200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3831003-3836002 Glycine max
Glyma.08G049200 10.0kb upstream 10.0kb upstream 16520 true Chr08: 3836003-3852522 Glycine max
Glyma.08G049200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3842523-3852522 Glycine max
Glyma.08G049200 10.0kb downstream 10.0kb downstream 16520 true Chr08: 3826003-3842522 Glycine max
Glyma.08G049200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3826003-3836002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304975 5265 Fabidae View MSA
124067611 5270 Rosid View MSA
123751802 5271 Pentapetalae View MSA
122793081 5272 Eudicot View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5611 0.0 38.8578    
cufflinks 37.3327 0.0 103.678 High High
cufflinks 8.43709 0.0 22.978    
cufflinks 18.5234 0.0 49.4921    
cufflinks 6.09696 0.0 16.9838    
cufflinks 9.28519 0.0 25.112    
cufflinks 16.8298 0.0 44.9162    
cufflinks 4.83656 0.0 13.7889   Low
cufflinks 4.66857 0.0 13.3882   Low
cufflinks 1.157        
cufflinks 0.029     Low Low
cufflinks 5.47        
cufflinks 0.326        
cufflinks 0.408        
cufflinks 0.417        
cufflinks 14.98     High  
cufflinks 0.005     Low Low
cufflinks 17.218     High High
cufflinks 8.691     High  
cufflinks 18.114     High High
cufflinks 0.023     Low Low
cufflinks 16.605     High  
cufflinks 12.627     High  
cufflinks 0.009     Low Low
cufflinks 15.844     High  
cufflinks 0.063     Low  

0 Strain