Gene : Glyma.08G050100 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.6.4.9 - Chaperonin ATPase / Chaperonin Genomic Order:  501
Name:  ? Glyma.08G050100 Secondary Identifier:  ? PAC:30537452
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G050100 0.5kb upstream 0.5kb upstream 4773 true Chr08: 3930000-3934772 Glycine max
Glyma.08G050100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3934273-3934772 Glycine max
Glyma.08G050100 0.5kb downstream 0.5kb downstream 4773 true Chr08: 3929500-3934272 Glycine max
Glyma.08G050100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3929500-3929999 Glycine max
Glyma.08G050100 1.0kb upstream 1.0kb upstream 5273 true Chr08: 3930000-3935272 Glycine max
Glyma.08G050100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3934273-3935272 Glycine max
Glyma.08G050100 1.0kb downstream 1.0kb downstream 5273 true Chr08: 3929000-3934272 Glycine max
Glyma.08G050100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3929000-3929999 Glycine max
Glyma.08G050100 2.0kb upstream 2.0kb upstream 6273 true Chr08: 3930000-3936272 Glycine max
Glyma.08G050100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3934273-3936272 Glycine max
Glyma.08G050100 2.0kb downstream 2.0kb downstream 6273 true Chr08: 3928000-3934272 Glycine max
Glyma.08G050100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3928000-3929999 Glycine max
Glyma.08G050100 5.0kb upstream 5.0kb upstream 9273 true Chr08: 3930000-3939272 Glycine max
Glyma.08G050100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3934273-3939272 Glycine max
Glyma.08G050100 5.0kb downstream 5.0kb downstream 9273 true Chr08: 3925000-3934272 Glycine max
Glyma.08G050100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3925000-3929999 Glycine max
Glyma.08G050100 10.0kb upstream 10.0kb upstream 14273 true Chr08: 3930000-3944272 Glycine max
Glyma.08G050100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3934273-3944272 Glycine max
Glyma.08G050100 10.0kb downstream 10.0kb downstream 14273 true Chr08: 3920000-3934272 Glycine max
Glyma.08G050100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3920000-3929999 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
122305362 5265 Fabidae View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9639 0.0 41.1746    
cufflinks 13.8059 0.0 42.831    
cufflinks 4.85407 0.0 16.3239   Low
cufflinks 14.6965 0.0 45.758    
cufflinks 20.0451 0.0 65.4892 High High
cufflinks 6.6918 0.0 19.9398   Low
cufflinks 21.54 0.0 69.6549   High
cufflinks 15.156 0.0 46.6568    
cufflinks 11.2483 0.0 34.5217    
cufflinks 10.831     High  
cufflinks 1.355       Low
cufflinks 7.466     High  
cufflinks 15.364     High High
cufflinks 19.801     High High
cufflinks 2.075       Low
cufflinks 8.268     High  
cufflinks 4.452        
cufflinks 8.634     High  
cufflinks 15.653     High High
cufflinks 5.42        
cufflinks 2.716       Low
cufflinks 6.337        
cufflinks 8.782     High  
cufflinks 2.047       Low
cufflinks 6.127        
cufflinks 4.069        

0 Strain