Gene : Glyma.08G051000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33414:SF2 - PLASTID MOVEMENT IMPAIRED1 Genomic Order:  510
Name:  ? Glyma.08G051000 Secondary Identifier:  ? PAC:30538320
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G051000 0.5kb upstream 0.5kb upstream 3137 true Chr08: 3973298-3976434 Glycine max
Glyma.08G051000 0.5kb upstream 0.5kb upstream 500 false Chr08: 3973298-3973797 Glycine max
Glyma.08G051000 0.5kb downstream 0.5kb downstream 3137 true Chr08: 3973798-3976934 Glycine max
Glyma.08G051000 0.5kb downstream 0.5kb downstream 500 false Chr08: 3976435-3976934 Glycine max
Glyma.08G051000 1.0kb upstream 1.0kb upstream 3637 true Chr08: 3972798-3976434 Glycine max
Glyma.08G051000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3972798-3973797 Glycine max
Glyma.08G051000 1.0kb downstream 1.0kb downstream 3637 true Chr08: 3973798-3977434 Glycine max
Glyma.08G051000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3976435-3977434 Glycine max
Glyma.08G051000 2.0kb upstream 2.0kb upstream 4637 true Chr08: 3971798-3976434 Glycine max
Glyma.08G051000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3971798-3973797 Glycine max
Glyma.08G051000 2.0kb downstream 2.0kb downstream 4637 true Chr08: 3973798-3978434 Glycine max
Glyma.08G051000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3976435-3978434 Glycine max
Glyma.08G051000 5.0kb upstream 5.0kb upstream 7637 true Chr08: 3968798-3976434 Glycine max
Glyma.08G051000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3968798-3973797 Glycine max
Glyma.08G051000 5.0kb downstream 5.0kb downstream 7637 true Chr08: 3973798-3981434 Glycine max
Glyma.08G051000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3976435-3981434 Glycine max
Glyma.08G051000 10.0kb upstream 10.0kb upstream 12637 true Chr08: 3963798-3976434 Glycine max
Glyma.08G051000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3963798-3973797 Glycine max
Glyma.08G051000 10.0kb downstream 10.0kb downstream 12637 true Chr08: 3973798-3986434 Glycine max
Glyma.08G051000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3976435-3986434 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310064 5265 Fabidae View MSA
124066768 5270 Rosid View MSA
123738803 5271 Pentapetalae View MSA
122793466 5272 Eudicot View MSA
122045060 5273 Angiosperm View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.5963 0.0 15.1225   High
cufflinks 1.16599 0.0 3.76856    
cufflinks 1.95001 0.0 5.82808    
cufflinks 1.38525 0.0 4.35356    
cufflinks 0.0215506 0.0 0.0885555 Low Low
cufflinks 0.106808 0.0 0.411064 Low  
cufflinks 0.354359 0.0 1.28567    
cufflinks 0.915217 0.0 3.04239    
cufflinks 0.0692154 0.0 0.271076 Low Low
cufflinks 1.024        
cufflinks 0.035     Low  
cufflinks 3.183        
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 9.695     High High
cufflinks 0.011     Low Low
cufflinks 1.944        
cufflinks 1.294        
cufflinks 15.303     High High
cufflinks 0.008     Low Low
cufflinks 13.287     High High
cufflinks 6.899        
cufflinks 0.023     Low  
cufflinks 13.067     High High
cufflinks 0.027     Low  

0 Strain