Gene : Glyma.08G051200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR Genomic Order:  512
Name:  ? Glyma.08G051200 Secondary Identifier:  ? PAC:30538911
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G051200 0.5kb upstream 0.5kb upstream 11769 true Chr08: 3981852-3993620 Glycine max
Glyma.08G051200 0.5kb upstream 0.5kb upstream 500 false Chr08: 3993121-3993620 Glycine max
Glyma.08G051200 0.5kb downstream 0.5kb downstream 11769 true Chr08: 3981352-3993120 Glycine max
Glyma.08G051200 0.5kb downstream 0.5kb downstream 500 false Chr08: 3981352-3981851 Glycine max
Glyma.08G051200 1.0kb upstream 1.0kb upstream 12269 true Chr08: 3981852-3994120 Glycine max
Glyma.08G051200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3993121-3994120 Glycine max
Glyma.08G051200 1.0kb downstream 1.0kb downstream 12269 true Chr08: 3980852-3993120 Glycine max
Glyma.08G051200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3980852-3981851 Glycine max
Glyma.08G051200 2.0kb upstream 2.0kb upstream 13269 true Chr08: 3981852-3995120 Glycine max
Glyma.08G051200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3993121-3995120 Glycine max
Glyma.08G051200 2.0kb downstream 2.0kb downstream 13269 true Chr08: 3979852-3993120 Glycine max
Glyma.08G051200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3979852-3981851 Glycine max
Glyma.08G051200 5.0kb upstream 5.0kb upstream 16269 true Chr08: 3981852-3998120 Glycine max
Glyma.08G051200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3993121-3998120 Glycine max
Glyma.08G051200 5.0kb downstream 5.0kb downstream 16269 true Chr08: 3976852-3993120 Glycine max
Glyma.08G051200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3976852-3981851 Glycine max
Glyma.08G051200 10.0kb upstream 10.0kb upstream 21269 true Chr08: 3981852-4003120 Glycine max
Glyma.08G051200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3993121-4003120 Glycine max
Glyma.08G051200 10.0kb downstream 10.0kb downstream 21269 true Chr08: 3971852-3993120 Glycine max
Glyma.08G051200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3971852-3981851 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308525 5265 Fabidae View MSA
124064938 5270 Rosid View MSA
123740720 5271 Pentapetalae View MSA
122785683 5272 Eudicot View MSA
122047327 5273 Angiosperm View MSA
121343812 5274 Embryophyte View MSA
123423812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.332 0.0 143.261 High  
cufflinks 30.1162 0.0 121.252 High Low
cufflinks 41.9657 0.0 181.032 High  
cufflinks 35.2886 0.0 150.887 High  
cufflinks 50.6567 0.0 228.677 High High
cufflinks 42.2828 0.0 182.696 High  
cufflinks 36.1556 0.0 146.431 High  
cufflinks 39.4973 0.0 165.705 High  
cufflinks 37.5139 0.0 156.597 High  
cufflinks 4.623        
cufflinks 3.332        
cufflinks 4.392        
cufflinks 7.679     High High
cufflinks 9.984     High High
cufflinks 2.907        
cufflinks 2.918        
cufflinks 3.554        
cufflinks 4.56        
cufflinks 3.972        
cufflinks 2.985        
cufflinks 4.261        
cufflinks 2.792        
cufflinks 3.087        
cufflinks 3.759        
cufflinks 3.075        
cufflinks 3.559        

0 Strain