Gene : Glyma.08G039500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR10383 - SERINE INCORPORATOR Genomic Order:  395
Name:  ? Glyma.08G039500 Secondary Identifier:  ? PAC:30540447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G039500 0.5kb upstream 0.5kb upstream 6638 true Chr08: 3100525-3107162 Glycine max
Glyma.08G039500 0.5kb upstream 0.5kb upstream 500 false Chr08: 3100525-3101024 Glycine max
Glyma.08G039500 0.5kb downstream 0.5kb downstream 6638 true Chr08: 3101025-3107662 Glycine max
Glyma.08G039500 0.5kb downstream 0.5kb downstream 500 false Chr08: 3107163-3107662 Glycine max
Glyma.08G039500 1.0kb upstream 1.0kb upstream 7138 true Chr08: 3100025-3107162 Glycine max
Glyma.08G039500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3100025-3101024 Glycine max
Glyma.08G039500 1.0kb downstream 1.0kb downstream 7138 true Chr08: 3101025-3108162 Glycine max
Glyma.08G039500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3107163-3108162 Glycine max
Glyma.08G039500 2.0kb upstream 2.0kb upstream 8138 true Chr08: 3099025-3107162 Glycine max
Glyma.08G039500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3099025-3101024 Glycine max
Glyma.08G039500 2.0kb downstream 2.0kb downstream 8138 true Chr08: 3101025-3109162 Glycine max
Glyma.08G039500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3107163-3109162 Glycine max
Glyma.08G039500 5.0kb upstream 5.0kb upstream 11138 true Chr08: 3096025-3107162 Glycine max
Glyma.08G039500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3096025-3101024 Glycine max
Glyma.08G039500 5.0kb downstream 5.0kb downstream 11138 true Chr08: 3101025-3112162 Glycine max
Glyma.08G039500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3107163-3112162 Glycine max
Glyma.08G039500 10.0kb upstream 10.0kb upstream 16138 true Chr08: 3091025-3107162 Glycine max
Glyma.08G039500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3091025-3101024 Glycine max
Glyma.08G039500 10.0kb downstream 10.0kb downstream 16138 true Chr08: 3101025-3117162 Glycine max
Glyma.08G039500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3107163-3117162 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301546 5265 Fabidae View MSA
124063391 5270 Rosid View MSA
123751443 5271 Pentapetalae View MSA
122793725 5272 Eudicot View MSA
122046221 5273 Angiosperm View MSA
121344586 5274 Embryophyte View MSA
123424460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.24759 0.0 1.72069   Low
cufflinks 0.443351 0.0 3.33397    
cufflinks 1.25364 0.0 7.9059    
cufflinks 1.30932 0.0 8.0513    
cufflinks 2.17104 0.0 11.6754    
cufflinks 11.697 0.0 42.6658   High
cufflinks 0.192643 0.0 1.34817 Low Low
cufflinks 3.67806 0.0 18.4495    
cufflinks 1.13913 0.0 9.12133    
cufflinks 0.235       High
cufflinks 0.127        
cufflinks 0.137        
cufflinks 0.457       High
cufflinks 0.313       High
cufflinks 0.048     Low Low
cufflinks 0.055     Low Low
cufflinks 0.11        
cufflinks 0.211        
cufflinks 0.066     Low  
cufflinks 0.076     Low  
cufflinks 0.132        
cufflinks 0.097        
cufflinks 0.07     Low  
cufflinks 0.062        
cufflinks 0.072     Low  
cufflinks 0.124        

0 Strain