Gene : Glyma.08G040500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22844:SF202 - STOMATAL CYTOKINESIS DEFECTIVE Genomic Order:  405
Name:  ? Glyma.08G040500 Secondary Identifier:  ? PAC:30535790
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G040500 0.5kb upstream 0.5kb upstream 17246 true Chr08: 3183397-3200642 Glycine max
Glyma.08G040500 0.5kb upstream 0.5kb upstream 500 false Chr08: 3200143-3200642 Glycine max
Glyma.08G040500 0.5kb downstream 0.5kb downstream 17246 true Chr08: 3182897-3200142 Glycine max
Glyma.08G040500 0.5kb downstream 0.5kb downstream 500 false Chr08: 3182897-3183396 Glycine max
Glyma.08G040500 1.0kb upstream 1.0kb upstream 17746 true Chr08: 3183397-3201142 Glycine max
Glyma.08G040500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3200143-3201142 Glycine max
Glyma.08G040500 1.0kb downstream 1.0kb downstream 17746 true Chr08: 3182397-3200142 Glycine max
Glyma.08G040500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3182397-3183396 Glycine max
Glyma.08G040500 2.0kb upstream 2.0kb upstream 18746 true Chr08: 3183397-3202142 Glycine max
Glyma.08G040500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3200143-3202142 Glycine max
Glyma.08G040500 2.0kb downstream 2.0kb downstream 18746 true Chr08: 3181397-3200142 Glycine max
Glyma.08G040500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3181397-3183396 Glycine max
Glyma.08G040500 5.0kb upstream 5.0kb upstream 21746 true Chr08: 3183397-3205142 Glycine max
Glyma.08G040500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3200143-3205142 Glycine max
Glyma.08G040500 5.0kb downstream 5.0kb downstream 21746 true Chr08: 3178397-3200142 Glycine max
Glyma.08G040500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3178397-3183396 Glycine max
Glyma.08G040500 10.0kb upstream 10.0kb upstream 26746 true Chr08: 3183397-3210142 Glycine max
Glyma.08G040500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3200143-3210142 Glycine max
Glyma.08G040500 10.0kb downstream 10.0kb downstream 26746 true Chr08: 3173397-3200142 Glycine max
Glyma.08G040500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3173397-3183396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303033 5265 Fabidae View MSA
124063489 5270 Rosid View MSA
123736587 5271 Pentapetalae View MSA
122787179 5272 Eudicot View MSA
122045572 5273 Angiosperm View MSA
121345381 5274 Embryophyte View MSA
123380209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5448 0.0 38.7876    
cufflinks 8.68854 0.0 25.9597   Low
cufflinks 12.8649 0.0 40.0807    
cufflinks 13.8109 0.0 43.1729    
cufflinks 13.5858 0.0 42.4363    
cufflinks 11.8737 0.0 36.5578    
cufflinks 8.79267 0.0 26.2876   Low
cufflinks 12.3095 0.0 37.944    
cufflinks 12.3731 0.0 38.1951    
cufflinks 3.523        
cufflinks 3.292        
cufflinks 3.139        
cufflinks 4.46       High
cufflinks 3.901        
cufflinks 2.448       Low
cufflinks 3.148        
cufflinks 2.403       Low
cufflinks 3.511        
cufflinks 3.551        
cufflinks 3.22        
cufflinks 4.602       High
cufflinks 3.47        
cufflinks 2.499       Low
cufflinks 3.99        
cufflinks 3.145        
cufflinks 3.531        

0 Strain