Gene : Glyma.08G042100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10641//PTHR10641:SF510 - MYB-LIKE DNA-BINDING PROTEIN MYB Genomic Order:  421
Name:  ? Glyma.08G042100 Secondary Identifier:  ? PAC:30539969
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G042100 0.5kb upstream 0.5kb upstream 2245 true Chr08: 3336357-3338601 Glycine max
Glyma.08G042100 0.5kb upstream 0.5kb upstream 500 false Chr08: 3336357-3336856 Glycine max
Glyma.08G042100 0.5kb downstream 0.5kb downstream 2245 true Chr08: 3336857-3339101 Glycine max
Glyma.08G042100 0.5kb downstream 0.5kb downstream 500 false Chr08: 3338602-3339101 Glycine max
Glyma.08G042100 1.0kb upstream 1.0kb upstream 2745 true Chr08: 3335857-3338601 Glycine max
Glyma.08G042100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3335857-3336856 Glycine max
Glyma.08G042100 1.0kb downstream 1.0kb downstream 2745 true Chr08: 3336857-3339601 Glycine max
Glyma.08G042100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3338602-3339601 Glycine max
Glyma.08G042100 2.0kb upstream 2.0kb upstream 3745 true Chr08: 3334857-3338601 Glycine max
Glyma.08G042100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3334857-3336856 Glycine max
Glyma.08G042100 2.0kb downstream 2.0kb downstream 3745 true Chr08: 3336857-3340601 Glycine max
Glyma.08G042100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3338602-3340601 Glycine max
Glyma.08G042100 5.0kb upstream 5.0kb upstream 6745 true Chr08: 3331857-3338601 Glycine max
Glyma.08G042100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3331857-3336856 Glycine max
Glyma.08G042100 5.0kb downstream 5.0kb downstream 6745 true Chr08: 3336857-3343601 Glycine max
Glyma.08G042100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3338602-3343601 Glycine max
Glyma.08G042100 10.0kb upstream 10.0kb upstream 11745 true Chr08: 3326857-3338601 Glycine max
Glyma.08G042100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3326857-3336856 Glycine max
Glyma.08G042100 10.0kb downstream 10.0kb downstream 11745 true Chr08: 3336857-3348601 Glycine max
Glyma.08G042100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3338602-3348601 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299767 5265 Fabidae View MSA
124069502 5270 Rosid View MSA
123750056 5271 Pentapetalae View MSA
122792133 5272 Eudicot View MSA
122048799 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121311117 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.69395 0.0 24.5815   High
cufflinks 0.0338007 0.0 0.144374 Low Low
cufflinks 45.3021 0.0 123.273 High High
cufflinks 0.148272 0.0 0.585608 Low  
cufflinks 0.164174 0.0 0.646816 Low  
cufflinks 1.19404 0.0 4.27477    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.668133 0.0 2.47557    
cufflinks 0.244809 0.0 0.949711 Low  
cufflinks 0.535        
cufflinks 0.574        
cufflinks 31.243     High High
cufflinks 0.927        
cufflinks 0.261        
cufflinks 2.381        
cufflinks 0.346        
cufflinks 1.912        
cufflinks 0.131       Low
cufflinks 0.817        
cufflinks 0.215        
cufflinks 0.851        
cufflinks 0.277        
cufflinks 3.44       High
cufflinks 0.715        
cufflinks 0.189       Low
cufflinks 1.047        

0 Strain