Gene : Glyma.08G042700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12701:SF12 - GB Genomic Order:  427
Name:  ? Glyma.08G042700 Secondary Identifier:  ? PAC:30539566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G042700 0.5kb upstream 0.5kb upstream 2011 true Chr08: 3379278-3381288 Glycine max
Glyma.08G042700 0.5kb upstream 0.5kb upstream 500 false Chr08: 3379278-3379777 Glycine max
Glyma.08G042700 0.5kb downstream 0.5kb downstream 2011 true Chr08: 3379778-3381788 Glycine max
Glyma.08G042700 0.5kb downstream 0.5kb downstream 500 false Chr08: 3381289-3381788 Glycine max
Glyma.08G042700 1.0kb upstream 1.0kb upstream 2511 true Chr08: 3378778-3381288 Glycine max
Glyma.08G042700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3378778-3379777 Glycine max
Glyma.08G042700 1.0kb downstream 1.0kb downstream 2511 true Chr08: 3379778-3382288 Glycine max
Glyma.08G042700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3381289-3382288 Glycine max
Glyma.08G042700 2.0kb upstream 2.0kb upstream 3511 true Chr08: 3377778-3381288 Glycine max
Glyma.08G042700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3377778-3379777 Glycine max
Glyma.08G042700 2.0kb downstream 2.0kb downstream 3511 true Chr08: 3379778-3383288 Glycine max
Glyma.08G042700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3381289-3383288 Glycine max
Glyma.08G042700 5.0kb upstream 5.0kb upstream 6511 true Chr08: 3374778-3381288 Glycine max
Glyma.08G042700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3374778-3379777 Glycine max
Glyma.08G042700 5.0kb downstream 5.0kb downstream 6511 true Chr08: 3379778-3386288 Glycine max
Glyma.08G042700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3381289-3386288 Glycine max
Glyma.08G042700 10.0kb upstream 10.0kb upstream 11511 true Chr08: 3369778-3381288 Glycine max
Glyma.08G042700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3369778-3379777 Glycine max
Glyma.08G042700 10.0kb downstream 10.0kb downstream 11511 true Chr08: 3379778-3391288 Glycine max
Glyma.08G042700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3381289-3391288 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041316 5273 Angiosperm View MSA
122304712 5265 Fabidae View MSA
124062686 5270 Rosid View MSA
123746776 5271 Pentapetalae View MSA
122788736 5272 Eudicot View MSA
121348812 5274 Embryophyte View MSA
123381026 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.7998 0.0 138.003 High  
cufflinks 52.8194 0.0 143.967 High  
cufflinks 53.7467 0.0 146.688 High  
cufflinks 50.9236 0.0 138.349 High  
cufflinks 86.1785 0.0 246.415 High  
cufflinks 86.619 0.0 248.364 High  
cufflinks 150.295 0.0 464.729 High High
cufflinks 72.2055 0.0 202.182 High  
cufflinks 46.9341 0.0 127.035 High  
cufflinks 83.679     High High
cufflinks 44.849     High  
cufflinks 46.731     High  
cufflinks 45.538     High  
cufflinks 55.449     High  
cufflinks 18.705     High Low
cufflinks 33.493     High  
cufflinks 353.52     High High
cufflinks 41.898     High  
cufflinks 31.782     High  
cufflinks 24.853     High  
cufflinks 38.078     High  
cufflinks 26.471     High  
cufflinks 31.076     High  
cufflinks 35.255     High  
cufflinks 24.689     High  
cufflinks 51.724     High  

0 Strain