Gene : Glyma.08G043000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33077:SF7 - PROTEIN TIFY 6A-RELATED Genomic Order:  430
Name:  ? Glyma.08G043000 Secondary Identifier:  ? PAC:30541430
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G043000 0.5kb upstream 0.5kb upstream 4206 true Chr08: 3399993-3404198 Glycine max
Glyma.08G043000 0.5kb upstream 0.5kb upstream 500 false Chr08: 3399993-3400492 Glycine max
Glyma.08G043000 0.5kb downstream 0.5kb downstream 4206 true Chr08: 3400493-3404698 Glycine max
Glyma.08G043000 0.5kb downstream 0.5kb downstream 500 false Chr08: 3404199-3404698 Glycine max
Glyma.08G043000 1.0kb upstream 1.0kb upstream 4706 true Chr08: 3399493-3404198 Glycine max
Glyma.08G043000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3399493-3400492 Glycine max
Glyma.08G043000 1.0kb downstream 1.0kb downstream 4706 true Chr08: 3400493-3405198 Glycine max
Glyma.08G043000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3404199-3405198 Glycine max
Glyma.08G043000 2.0kb upstream 2.0kb upstream 5706 true Chr08: 3398493-3404198 Glycine max
Glyma.08G043000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3398493-3400492 Glycine max
Glyma.08G043000 2.0kb downstream 2.0kb downstream 5706 true Chr08: 3400493-3406198 Glycine max
Glyma.08G043000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3404199-3406198 Glycine max
Glyma.08G043000 5.0kb upstream 5.0kb upstream 8706 true Chr08: 3395493-3404198 Glycine max
Glyma.08G043000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3395493-3400492 Glycine max
Glyma.08G043000 5.0kb downstream 5.0kb downstream 8706 true Chr08: 3400493-3409198 Glycine max
Glyma.08G043000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3404199-3409198 Glycine max
Glyma.08G043000 10.0kb upstream 10.0kb upstream 13706 true Chr08: 3390493-3404198 Glycine max
Glyma.08G043000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3390493-3400492 Glycine max
Glyma.08G043000 10.0kb downstream 10.0kb downstream 13706 true Chr08: 3400493-3414198 Glycine max
Glyma.08G043000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3404199-3414198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307775 5265 Fabidae View MSA
124069468 5270 Rosid View MSA
123746675 5271 Pentapetalae View MSA
122792842 5272 Eudicot View MSA
122042775 5273 Angiosperm View MSA
121351436 5274 Embryophyte View MSA
123382165 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.2913 0.0 320.907 High High
cufflinks 16.436 0.0 69.1976   Low
cufflinks 23.0413 0.0 95.2026 High  
cufflinks 28.6994 0.0 119.759 High  
cufflinks 48.4021 0.0 216.214 High High
cufflinks 32.1228 0.0 134.514 High  
cufflinks 19.6973 0.0 81.8412   Low
cufflinks 31.4492 0.0 131.969 High  
cufflinks 36.3565 0.0 154.586 High  
cufflinks 7.524        
cufflinks 6.14     High  
cufflinks 2.922       Low
cufflinks 4.184        
cufflinks 4.078        
cufflinks 4.761        
cufflinks 3.944        
cufflinks 9.173     High High
cufflinks 5.456        
cufflinks 3.546        
cufflinks 2.504       Low
cufflinks 8.403     High High
cufflinks 3.785        
cufflinks 6.317        
cufflinks 7.799     High  
cufflinks 3.148       Low
cufflinks 14.532     High High

0 Strain