Gene : Glyma.08G044000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31707:SF27 - PECTINESTERASE/PECTINESTERASE INHIBITOR 6-RELATED Genomic Order:  440
Name:  ? Glyma.08G044000 Secondary Identifier:  ? PAC:30535564
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G044000 0.5kb upstream 0.5kb upstream 3871 true Chr08: 3473723-3477593 Glycine max
Glyma.08G044000 0.5kb upstream 0.5kb upstream 500 false Chr08: 3473723-3474222 Glycine max
Glyma.08G044000 0.5kb downstream 0.5kb downstream 3871 true Chr08: 3474223-3478093 Glycine max
Glyma.08G044000 0.5kb downstream 0.5kb downstream 500 false Chr08: 3477594-3478093 Glycine max
Glyma.08G044000 1.0kb upstream 1.0kb upstream 4371 true Chr08: 3473223-3477593 Glycine max
Glyma.08G044000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3473223-3474222 Glycine max
Glyma.08G044000 1.0kb downstream 1.0kb downstream 4371 true Chr08: 3474223-3478593 Glycine max
Glyma.08G044000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3477594-3478593 Glycine max
Glyma.08G044000 2.0kb upstream 2.0kb upstream 5371 true Chr08: 3472223-3477593 Glycine max
Glyma.08G044000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3472223-3474222 Glycine max
Glyma.08G044000 2.0kb downstream 2.0kb downstream 5371 true Chr08: 3474223-3479593 Glycine max
Glyma.08G044000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3477594-3479593 Glycine max
Glyma.08G044000 5.0kb upstream 5.0kb upstream 8371 true Chr08: 3469223-3477593 Glycine max
Glyma.08G044000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3469223-3474222 Glycine max
Glyma.08G044000 5.0kb downstream 5.0kb downstream 8371 true Chr08: 3474223-3482593 Glycine max
Glyma.08G044000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3477594-3482593 Glycine max
Glyma.08G044000 10.0kb upstream 10.0kb upstream 13371 true Chr08: 3464223-3477593 Glycine max
Glyma.08G044000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3464223-3474222 Glycine max
Glyma.08G044000 10.0kb downstream 10.0kb downstream 13371 true Chr08: 3474223-3487593 Glycine max
Glyma.08G044000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3477594-3487593 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310189 5265 Fabidae View MSA
124063381 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2224 0.0 50.8848   High
cufflinks 0.643364 0.0 3.62342    
cufflinks 0.258724 0.0 1.74952    
cufflinks 0.0510375 0.0 0.411057 Low Low
cufflinks 0.610867 0.0 3.47752    
cufflinks 4.21313 0.0 16.0175    
cufflinks 0.586165 0.0 3.38673    
cufflinks 5.99052 0.0 22.0884   High
cufflinks 1.11459 0.0 5.93507    
cufflinks 1.396       High
cufflinks 0.085        
cufflinks 0.007     Low Low
cufflinks 0.073     Low  
cufflinks 0.007     Low Low
cufflinks 0.02     Low  
cufflinks 0.114        
cufflinks 0.06     Low  
cufflinks 0.007     Low Low
cufflinks 0.322       High
cufflinks 0.053     Low  
cufflinks 0.209        
cufflinks 0.081     Low  
cufflinks 0.005     Low Low
cufflinks 0.09        
cufflinks 0.121        
cufflinks 0.084        

0 Strain