Gene : Glyma.08G091200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31142:SF3 - PROTEIN TOM THREE HOMOLOG 1-RELATED Genomic Order:  912
Name:  ? Glyma.08G091200 Secondary Identifier:  ? PAC:30537877
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G091200 0.5kb upstream 0.5kb upstream 5711 true Chr08: 6853980-6859690 Glycine max
Glyma.08G091200 0.5kb upstream 0.5kb upstream 500 false Chr08: 6859191-6859690 Glycine max
Glyma.08G091200 0.5kb downstream 0.5kb downstream 5711 true Chr08: 6853480-6859190 Glycine max
Glyma.08G091200 0.5kb downstream 0.5kb downstream 500 false Chr08: 6853480-6853979 Glycine max
Glyma.08G091200 1.0kb upstream 1.0kb upstream 6211 true Chr08: 6853980-6860190 Glycine max
Glyma.08G091200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6859191-6860190 Glycine max
Glyma.08G091200 1.0kb downstream 1.0kb downstream 6211 true Chr08: 6852980-6859190 Glycine max
Glyma.08G091200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6852980-6853979 Glycine max
Glyma.08G091200 2.0kb upstream 2.0kb upstream 7211 true Chr08: 6853980-6861190 Glycine max
Glyma.08G091200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6859191-6861190 Glycine max
Glyma.08G091200 2.0kb downstream 2.0kb downstream 7211 true Chr08: 6851980-6859190 Glycine max
Glyma.08G091200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6851980-6853979 Glycine max
Glyma.08G091200 5.0kb upstream 5.0kb upstream 10211 true Chr08: 6853980-6864190 Glycine max
Glyma.08G091200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6859191-6864190 Glycine max
Glyma.08G091200 5.0kb downstream 5.0kb downstream 10211 true Chr08: 6848980-6859190 Glycine max
Glyma.08G091200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6848980-6853979 Glycine max
Glyma.08G091200 10.0kb upstream 10.0kb upstream 15211 true Chr08: 6853980-6869190 Glycine max
Glyma.08G091200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6859191-6869190 Glycine max
Glyma.08G091200 10.0kb downstream 10.0kb downstream 15211 true Chr08: 6843980-6859190 Glycine max
Glyma.08G091200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6843980-6853979 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311267 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2981 0.0 94.2384 High  
cufflinks 25.0459 0.0 93.423 High Low
cufflinks 26.5814 0.0 100.251 High  
cufflinks 22.6873 0.0 85.1463 High Low
cufflinks 44.5038 0.0 173.993 High  
cufflinks 47.7653 0.0 189.37 High  
cufflinks 42.5387 0.0 164.7 High  
cufflinks 43.6873 0.0 169.891 High  
cufflinks 49.6516 0.0 178.661 High High
cufflinks 2.019        
cufflinks 3.416       High
cufflinks 1.82        
cufflinks 2.629        
cufflinks 3.015        
cufflinks 4.689       High
cufflinks 1.703       Low
cufflinks 1.857        
cufflinks 1.954        
cufflinks 2.014        
cufflinks 2.323        
cufflinks 2.534        
cufflinks 2.042        
cufflinks 1.444       Low
cufflinks 4.041       High
cufflinks 2.12        
cufflinks 2.245        

0 Strain