Gene : Glyma.08G091300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11999//PTHR11999:SF105 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE Genomic Order:  913
Name:  ? Glyma.08G091300 Secondary Identifier:  ? PAC:30541149
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUDEG-I-PWY Glycine max pathologic  
Gmax PWY0-1305 Glycine max pathologic  
Gmax PWY-4321 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G091300 0.5kb upstream 0.5kb upstream 2845 true Chr08: 6864881-6867725 Glycine max
Glyma.08G091300 0.5kb upstream 0.5kb upstream 500 false Chr08: 6867226-6867725 Glycine max
Glyma.08G091300 0.5kb downstream 0.5kb downstream 2845 true Chr08: 6864381-6867225 Glycine max
Glyma.08G091300 0.5kb downstream 0.5kb downstream 500 false Chr08: 6864381-6864880 Glycine max
Glyma.08G091300 1.0kb upstream 1.0kb upstream 3345 true Chr08: 6864881-6868225 Glycine max
Glyma.08G091300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6867226-6868225 Glycine max
Glyma.08G091300 1.0kb downstream 1.0kb downstream 3345 true Chr08: 6863881-6867225 Glycine max
Glyma.08G091300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6863881-6864880 Glycine max
Glyma.08G091300 2.0kb upstream 2.0kb upstream 4345 true Chr08: 6864881-6869225 Glycine max
Glyma.08G091300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6867226-6869225 Glycine max
Glyma.08G091300 2.0kb downstream 2.0kb downstream 4345 true Chr08: 6862881-6867225 Glycine max
Glyma.08G091300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6862881-6864880 Glycine max
Glyma.08G091300 5.0kb upstream 5.0kb upstream 7345 true Chr08: 6864881-6872225 Glycine max
Glyma.08G091300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6867226-6872225 Glycine max
Glyma.08G091300 5.0kb downstream 5.0kb downstream 7345 true Chr08: 6859881-6867225 Glycine max
Glyma.08G091300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6859881-6864880 Glycine max
Glyma.08G091300 10.0kb upstream 10.0kb upstream 12345 true Chr08: 6864881-6877225 Glycine max
Glyma.08G091300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6867226-6877225 Glycine max
Glyma.08G091300 10.0kb downstream 10.0kb downstream 12345 true Chr08: 6854881-6867225 Glycine max
Glyma.08G091300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6854881-6864880 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658615 5273 Angiosperm View MSA
122248450 5265 Fabidae Singleton cluster - no MSA
124042737 5270 Rosid View MSA
123612911 5271 Pentapetalae View MSA
122647390 5272 Eudicot View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01355 0.0 0.0610141 Low  
cufflinks 0.00382353 0.0 0.0197419 Low  
cufflinks 0.057129 0.0 0.231599 Low  
cufflinks 0.0632002 0.0 0.255091 Low  
cufflinks 0.0107815 0.0 0.0495645 Low  
cufflinks 0.0117398 0.0 0.0536024 Low  
cufflinks 0.123865 0.0 0.487458 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.78191E-4 0.0 0.00393498 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.24        
cufflinks 0.021     Low  
cufflinks 0.013     Low  
cufflinks 0.008     Low Low
cufflinks 3.203       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.271        
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.127        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.107        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.349        

0 Strain