Gene : Glyma.08G082100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10840 - PROGRAMMED CELL DEATH PROTEIN 5 Genomic Order:  821
Name:  ? Glyma.08G082100 Secondary Identifier:  ? PAC:30541219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G082100 0.5kb upstream 0.5kb upstream 3767 true Chr08: 6195559-6199325 Glycine max
Glyma.08G082100 0.5kb upstream 0.5kb upstream 500 false Chr08: 6195559-6196058 Glycine max
Glyma.08G082100 0.5kb downstream 0.5kb downstream 3767 true Chr08: 6196059-6199825 Glycine max
Glyma.08G082100 0.5kb downstream 0.5kb downstream 500 false Chr08: 6199326-6199825 Glycine max
Glyma.08G082100 1.0kb upstream 1.0kb upstream 4267 true Chr08: 6195059-6199325 Glycine max
Glyma.08G082100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6195059-6196058 Glycine max
Glyma.08G082100 1.0kb downstream 1.0kb downstream 4267 true Chr08: 6196059-6200325 Glycine max
Glyma.08G082100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6199326-6200325 Glycine max
Glyma.08G082100 2.0kb upstream 2.0kb upstream 5267 true Chr08: 6194059-6199325 Glycine max
Glyma.08G082100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6194059-6196058 Glycine max
Glyma.08G082100 2.0kb downstream 2.0kb downstream 5267 true Chr08: 6196059-6201325 Glycine max
Glyma.08G082100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6199326-6201325 Glycine max
Glyma.08G082100 5.0kb upstream 5.0kb upstream 8267 true Chr08: 6191059-6199325 Glycine max
Glyma.08G082100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6191059-6196058 Glycine max
Glyma.08G082100 5.0kb downstream 5.0kb downstream 8267 true Chr08: 6196059-6204325 Glycine max
Glyma.08G082100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6199326-6204325 Glycine max
Glyma.08G082100 10.0kb upstream 10.0kb upstream 13267 true Chr08: 6186059-6199325 Glycine max
Glyma.08G082100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6186059-6196058 Glycine max
Glyma.08G082100 10.0kb downstream 10.0kb downstream 13267 true Chr08: 6196059-6209325 Glycine max
Glyma.08G082100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6199326-6209325 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300116 5265 Fabidae View MSA
124064859 5270 Rosid View MSA
123737967 5271 Pentapetalae View MSA
122786334 5272 Eudicot View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.4147 0.0 220.201 High  
cufflinks 50.4128 0.0 203.105 High Low
cufflinks 48.9589 0.0 172.384 High Low
cufflinks 56.4868 0.0 230.445 High  
cufflinks 64.4507 0.0 232.611 High  
cufflinks 86.3242 0.0 376.792 High High
cufflinks 65.7613 0.0 272.417 High  
cufflinks 74.1819 0.0 311.096 High  
cufflinks 65.8695 0.0 271.511 High  
cufflinks 3.734        
cufflinks 3.587        
cufflinks 3.477        
cufflinks 4.297       High
cufflinks 4.509       High
cufflinks 3.412        
cufflinks 4.067        
cufflinks 3.681        
cufflinks 3.613        
cufflinks 3.35        
cufflinks 4.264       High
cufflinks 3.111       Low
cufflinks 3.82        
cufflinks 3.19       Low
cufflinks 3.31        
cufflinks 4.621       High
cufflinks 2.916       Low

0 Strain