Gene : Glyma.08G082900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  829
Name:  ? Glyma.08G082900 Secondary Identifier:  ? PAC:30536684
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G082900 0.5kb upstream 0.5kb upstream 1857 true Chr08: 6276079-6277935 Glycine max
Glyma.08G082900 0.5kb upstream 0.5kb upstream 500 false Chr08: 6276079-6276578 Glycine max
Glyma.08G082900 0.5kb downstream 0.5kb downstream 1857 true Chr08: 6276579-6278435 Glycine max
Glyma.08G082900 0.5kb downstream 0.5kb downstream 500 false Chr08: 6277936-6278435 Glycine max
Glyma.08G082900 1.0kb upstream 1.0kb upstream 2357 true Chr08: 6275579-6277935 Glycine max
Glyma.08G082900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6275579-6276578 Glycine max
Glyma.08G082900 1.0kb downstream 1.0kb downstream 2357 true Chr08: 6276579-6278935 Glycine max
Glyma.08G082900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6277936-6278935 Glycine max
Glyma.08G082900 2.0kb upstream 2.0kb upstream 3357 true Chr08: 6274579-6277935 Glycine max
Glyma.08G082900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6274579-6276578 Glycine max
Glyma.08G082900 2.0kb downstream 2.0kb downstream 3357 true Chr08: 6276579-6279935 Glycine max
Glyma.08G082900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6277936-6279935 Glycine max
Glyma.08G082900 5.0kb upstream 5.0kb upstream 6357 true Chr08: 6271579-6277935 Glycine max
Glyma.08G082900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6271579-6276578 Glycine max
Glyma.08G082900 5.0kb downstream 5.0kb downstream 6357 true Chr08: 6276579-6282935 Glycine max
Glyma.08G082900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6277936-6282935 Glycine max
Glyma.08G082900 10.0kb upstream 10.0kb upstream 11357 true Chr08: 6266579-6277935 Glycine max
Glyma.08G082900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6266579-6276578 Glycine max
Glyma.08G082900 10.0kb downstream 10.0kb downstream 11357 true Chr08: 6276579-6287935 Glycine max
Glyma.08G082900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6277936-6287935 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314115 5265 Fabidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1129.91 0.0 7254.32 High  
cufflinks 2292.51 0.0 21521.0 High High
cufflinks 941.475 0.0 5404.34 High  
cufflinks 1046.01 0.0 6409.96 High  
cufflinks 55.4178 0.0 155.513 High Low
cufflinks 90.4777 0.0 269.558 High Low
cufflinks 1155.8 0.0 7598.91 High  
cufflinks 580.95 0.0 2828.94 High  
cufflinks 43.2011 0.0 118.197 High Low
cufflinks 1271.548     High  
cufflinks 2.073       Low
cufflinks 1053.726     High  
cufflinks 3.126        
cufflinks 1.259       Low
cufflinks 2.79        
cufflinks 3987.818     High High
cufflinks 1.86       Low
cufflinks 996.717     High  
cufflinks 2022.533     High  
cufflinks 3537.972     High High
cufflinks 4.52        
cufflinks 3781.92     High High
cufflinks 4652.611     High High
cufflinks 4.661        
cufflinks 3848.854     High High
cufflinks 1.663       Low

0 Strain