Gene : Glyma.08G084300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11712:SF226 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  843
Name:  ? Glyma.08G084300 Secondary Identifier:  ? PAC:30540728
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax FASYN-ELONG-PWY Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY-6282 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  
Gmax PWY-7663 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G084300 0.5kb upstream 0.5kb upstream 5546 true Chr08: 6353866-6359411 Glycine max
Glyma.08G084300 0.5kb upstream 0.5kb upstream 500 false Chr08: 6353866-6354365 Glycine max
Glyma.08G084300 0.5kb downstream 0.5kb downstream 5546 true Chr08: 6354366-6359911 Glycine max
Glyma.08G084300 0.5kb downstream 0.5kb downstream 500 false Chr08: 6359412-6359911 Glycine max
Glyma.08G084300 1.0kb upstream 1.0kb upstream 6046 true Chr08: 6353366-6359411 Glycine max
Glyma.08G084300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6353366-6354365 Glycine max
Glyma.08G084300 1.0kb downstream 1.0kb downstream 6046 true Chr08: 6354366-6360411 Glycine max
Glyma.08G084300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6359412-6360411 Glycine max
Glyma.08G084300 2.0kb upstream 2.0kb upstream 7046 true Chr08: 6352366-6359411 Glycine max
Glyma.08G084300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6352366-6354365 Glycine max
Glyma.08G084300 2.0kb downstream 2.0kb downstream 7046 true Chr08: 6354366-6361411 Glycine max
Glyma.08G084300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6359412-6361411 Glycine max
Glyma.08G084300 5.0kb upstream 5.0kb upstream 10046 true Chr08: 6349366-6359411 Glycine max
Glyma.08G084300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6349366-6354365 Glycine max
Glyma.08G084300 5.0kb downstream 5.0kb downstream 10046 true Chr08: 6354366-6364411 Glycine max
Glyma.08G084300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6359412-6364411 Glycine max
Glyma.08G084300 10.0kb upstream 10.0kb upstream 15046 true Chr08: 6344366-6359411 Glycine max
Glyma.08G084300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6344366-6354365 Glycine max
Glyma.08G084300 10.0kb downstream 10.0kb downstream 15046 true Chr08: 6354366-6369411 Glycine max
Glyma.08G084300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6359412-6369411 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307628 5265 Fabidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2886 0.0 32.9606    
cufflinks 19.9438 0.0 53.2518    
cufflinks 5.39863 0.0 15.4821   Low
cufflinks 23.6061 0.0 63.2911 High  
cufflinks 37.411 0.0 103.509 High High
cufflinks 17.2412 0.0 45.9989    
cufflinks 52.8022 0.0 151.551 High High
cufflinks 14.8233 0.0 39.5997    
cufflinks 23.2783 0.0 62.4208 High  
cufflinks 7.459        
cufflinks 0.754       Low
cufflinks 4.16        
cufflinks 14.266     High High
cufflinks 22.123     High High
cufflinks 2.934        
cufflinks 12.071     High  
cufflinks 2.656        
cufflinks 8.477     High  
cufflinks 9.301     High  
cufflinks 8.344     High  
cufflinks 1.904       Low
cufflinks 8.362     High  
cufflinks 12.468     High  
cufflinks 1.232       Low
cufflinks 9.845     High  
cufflinks 2.299        

0 Strain