Gene : Glyma.08G086000 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  860
Name:  ? Glyma.08G086000 Secondary Identifier:  ? PAC:30538084
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G086000 0.5kb upstream 0.5kb upstream 5691 true Chr08: 6480991-6486681 Glycine max
Glyma.08G086000 0.5kb upstream 0.5kb upstream 500 false Chr08: 6480991-6481490 Glycine max
Glyma.08G086000 0.5kb downstream 0.5kb downstream 5691 true Chr08: 6481491-6487181 Glycine max
Glyma.08G086000 0.5kb downstream 0.5kb downstream 500 false Chr08: 6486682-6487181 Glycine max
Glyma.08G086000 1.0kb upstream 1.0kb upstream 6191 true Chr08: 6480491-6486681 Glycine max
Glyma.08G086000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6480491-6481490 Glycine max
Glyma.08G086000 1.0kb downstream 1.0kb downstream 6191 true Chr08: 6481491-6487681 Glycine max
Glyma.08G086000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6486682-6487681 Glycine max
Glyma.08G086000 2.0kb upstream 2.0kb upstream 7191 true Chr08: 6479491-6486681 Glycine max
Glyma.08G086000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6479491-6481490 Glycine max
Glyma.08G086000 2.0kb downstream 2.0kb downstream 7191 true Chr08: 6481491-6488681 Glycine max
Glyma.08G086000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6486682-6488681 Glycine max
Glyma.08G086000 5.0kb upstream 5.0kb upstream 10191 true Chr08: 6476491-6486681 Glycine max
Glyma.08G086000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6476491-6481490 Glycine max
Glyma.08G086000 5.0kb downstream 5.0kb downstream 10191 true Chr08: 6481491-6491681 Glycine max
Glyma.08G086000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6486682-6491681 Glycine max
Glyma.08G086000 10.0kb upstream 10.0kb upstream 15191 true Chr08: 6471491-6486681 Glycine max
Glyma.08G086000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6471491-6481490 Glycine max
Glyma.08G086000 10.0kb downstream 10.0kb downstream 15191 true Chr08: 6481491-6496681 Glycine max
Glyma.08G086000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6486682-6496681 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312207 5265 Fabidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.90527 0.0 30.1576    
cufflinks 16.824 0.0 58.0376   High
cufflinks 7.72196 0.0 30.5591    
cufflinks 10.2911 0.0 36.9709    
cufflinks 7.93319 0.0 30.3323    
cufflinks 8.47635 0.0 31.6367    
cufflinks 5.71333 0.0 20.3727   Low
cufflinks 10.0736 0.0 36.7378    
cufflinks 5.58142 0.0 23.1636   Low
cufflinks 1.782        
cufflinks 0.448       Low
cufflinks 1.684        
cufflinks 1.549        
cufflinks 1.656        
cufflinks 0.233       Low
cufflinks 1.469        
cufflinks 0.587        
cufflinks 2.546       High
cufflinks 4.433       High
cufflinks 1.612        
cufflinks 0.547        
cufflinks 1.739        
cufflinks 1.749        
cufflinks 0.563        
cufflinks 1.541        
cufflinks 0.388       Low

0 Strain