Gene : Glyma.08G086100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF725 - IMMUNOGLOBULIN E-SET DOMAIN-CONTAINING PROTEIN Genomic Order:  861
Name:  ? Glyma.08G086100 Secondary Identifier:  ? PAC:30538602
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G086100 0.5kb upstream 0.5kb upstream 21388 true Chr08: 6494622-6516009 Glycine max
Glyma.08G086100 0.5kb upstream 0.5kb upstream 500 false Chr08: 6494622-6495121 Glycine max
Glyma.08G086100 0.5kb downstream 0.5kb downstream 21388 true Chr08: 6495122-6516509 Glycine max
Glyma.08G086100 0.5kb downstream 0.5kb downstream 500 false Chr08: 6516010-6516509 Glycine max
Glyma.08G086100 1.0kb upstream 1.0kb upstream 21888 true Chr08: 6494122-6516009 Glycine max
Glyma.08G086100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6494122-6495121 Glycine max
Glyma.08G086100 1.0kb downstream 1.0kb downstream 21888 true Chr08: 6495122-6517009 Glycine max
Glyma.08G086100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6516010-6517009 Glycine max
Glyma.08G086100 2.0kb upstream 2.0kb upstream 22888 true Chr08: 6493122-6516009 Glycine max
Glyma.08G086100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6493122-6495121 Glycine max
Glyma.08G086100 2.0kb downstream 2.0kb downstream 22888 true Chr08: 6495122-6518009 Glycine max
Glyma.08G086100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6516010-6518009 Glycine max
Glyma.08G086100 5.0kb upstream 5.0kb upstream 25888 true Chr08: 6490122-6516009 Glycine max
Glyma.08G086100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6490122-6495121 Glycine max
Glyma.08G086100 5.0kb downstream 5.0kb downstream 25888 true Chr08: 6495122-6521009 Glycine max
Glyma.08G086100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6516010-6521009 Glycine max
Glyma.08G086100 10.0kb upstream 10.0kb upstream 30888 true Chr08: 6485122-6516009 Glycine max
Glyma.08G086100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6485122-6495121 Glycine max
Glyma.08G086100 10.0kb downstream 10.0kb downstream 30888 true Chr08: 6495122-6526009 Glycine max
Glyma.08G086100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6516010-6526009 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240151 5265 Fabidae Singleton cluster - no MSA
123985264 5270 Rosid Singleton cluster - no MSA
123742521 5271 Pentapetalae View MSA
122789945 5272 Eudicot View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.31337 0.0 16.2564    
cufflinks 3.98694 0.0 16.1735    
cufflinks 4.72317 0.0 16.1473    
cufflinks 5.10992 0.0 19.5025   High
cufflinks 2.64317 0.0 11.7457   Low
cufflinks 2.11518 0.0 7.4144   Low
cufflinks 5.11772 0.0 17.4085   High
cufflinks 3.60886 0.0 15.6385    
cufflinks 3.30608 0.0 12.3865    
cufflinks 0.377        
cufflinks 0.296       Low
cufflinks 0.521       High
cufflinks 0.307        
cufflinks 0.275       Low
cufflinks 0.299       Low
cufflinks 0.415        
cufflinks 0.276       Low
cufflinks 0.544       High
cufflinks 0.589       High
cufflinks 0.458        
cufflinks 0.312        
cufflinks 0.522       High
cufflinks 0.457        
cufflinks 0.387        
cufflinks 0.447        
cufflinks 0.365        

0 Strain