Gene : Glyma.08G072400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  724
Name:  ? Glyma.08G072400 Secondary Identifier:  ? PAC:30540313
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G072400 0.5kb upstream 0.5kb upstream 15947 true Chr08: 5539547-5555493 Glycine max
Glyma.08G072400 0.5kb upstream 0.5kb upstream 500 false Chr08: 5539547-5540046 Glycine max
Glyma.08G072400 0.5kb downstream 0.5kb downstream 15947 true Chr08: 5540047-5555993 Glycine max
Glyma.08G072400 0.5kb downstream 0.5kb downstream 500 false Chr08: 5555494-5555993 Glycine max
Glyma.08G072400 1.0kb upstream 1.0kb upstream 16447 true Chr08: 5539047-5555493 Glycine max
Glyma.08G072400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5539047-5540046 Glycine max
Glyma.08G072400 1.0kb downstream 1.0kb downstream 16447 true Chr08: 5540047-5556493 Glycine max
Glyma.08G072400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5555494-5556493 Glycine max
Glyma.08G072400 2.0kb upstream 2.0kb upstream 17447 true Chr08: 5538047-5555493 Glycine max
Glyma.08G072400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5538047-5540046 Glycine max
Glyma.08G072400 2.0kb downstream 2.0kb downstream 17447 true Chr08: 5540047-5557493 Glycine max
Glyma.08G072400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5555494-5557493 Glycine max
Glyma.08G072400 5.0kb upstream 5.0kb upstream 20447 true Chr08: 5535047-5555493 Glycine max
Glyma.08G072400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5535047-5540046 Glycine max
Glyma.08G072400 5.0kb downstream 5.0kb downstream 20447 true Chr08: 5540047-5560493 Glycine max
Glyma.08G072400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5555494-5560493 Glycine max
Glyma.08G072400 10.0kb upstream 10.0kb upstream 25447 true Chr08: 5530047-5555493 Glycine max
Glyma.08G072400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5530047-5540046 Glycine max
Glyma.08G072400 10.0kb downstream 10.0kb downstream 25447 true Chr08: 5540047-5565493 Glycine max
Glyma.08G072400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5555494-5565493 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313280 5265 Fabidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.70718 0.0 37.587   High
cufflinks 9.16193 0.0 35.3459    
cufflinks 14.1107 0.0 55.4742   High
cufflinks 3.75655 0.0 20.3204    
cufflinks 2.80028 0.0 11.6898    
cufflinks 4.76478 0.0 19.2326    
cufflinks 1.74361 0.0 6.92355   Low
cufflinks 2.47192 0.0 10.595    
cufflinks 2.93596 0.0 11.8461    
cufflinks 0.721        
cufflinks 0.404        
cufflinks 0.779        
cufflinks 0.151       Low
cufflinks 0.106       Low
cufflinks 0.293        
cufflinks 1.276        
cufflinks 0.568        
cufflinks 0.508        
cufflinks 1.518       High
cufflinks 0.958        
cufflinks 0.624        
cufflinks 1.055        
cufflinks 2.481       High
cufflinks 0.9        
cufflinks 0.981        
cufflinks 0.5        

0 Strain