Gene : Glyma.08G072800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36080:SF1 - DBJ Genomic Order:  728
Name:  ? Glyma.08G072800 Secondary Identifier:  ? PAC:30540088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G072800 0.5kb upstream 0.5kb upstream 1431 true Chr08: 5575454-5576884 Glycine max
Glyma.08G072800 0.5kb upstream 0.5kb upstream 500 false Chr08: 5576385-5576884 Glycine max
Glyma.08G072800 0.5kb downstream 0.5kb downstream 1431 true Chr08: 5574954-5576384 Glycine max
Glyma.08G072800 0.5kb downstream 0.5kb downstream 500 false Chr08: 5574954-5575453 Glycine max
Glyma.08G072800 1.0kb upstream 1.0kb upstream 1931 true Chr08: 5575454-5577384 Glycine max
Glyma.08G072800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5576385-5577384 Glycine max
Glyma.08G072800 1.0kb downstream 1.0kb downstream 1931 true Chr08: 5574454-5576384 Glycine max
Glyma.08G072800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5574454-5575453 Glycine max
Glyma.08G072800 2.0kb upstream 2.0kb upstream 2931 true Chr08: 5575454-5578384 Glycine max
Glyma.08G072800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5576385-5578384 Glycine max
Glyma.08G072800 2.0kb downstream 2.0kb downstream 2931 true Chr08: 5573454-5576384 Glycine max
Glyma.08G072800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5573454-5575453 Glycine max
Glyma.08G072800 5.0kb upstream 5.0kb upstream 5931 true Chr08: 5575454-5581384 Glycine max
Glyma.08G072800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5576385-5581384 Glycine max
Glyma.08G072800 5.0kb downstream 5.0kb downstream 5931 true Chr08: 5570454-5576384 Glycine max
Glyma.08G072800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5570454-5575453 Glycine max
Glyma.08G072800 10.0kb upstream 10.0kb upstream 10931 true Chr08: 5575454-5586384 Glycine max
Glyma.08G072800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5576385-5586384 Glycine max
Glyma.08G072800 10.0kb downstream 10.0kb downstream 10931 true Chr08: 5565454-5576384 Glycine max
Glyma.08G072800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5565454-5575453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300442 5265 Fabidae View MSA
124066337 5270 Rosid View MSA
123744862 5271 Pentapetalae View MSA
122787183 5272 Eudicot View MSA
122046943 5273 Angiosperm View MSA
121344014 5274 Embryophyte View MSA
123425570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8163 0.0 31.4983   High
cufflinks 5.52106 0.0 17.6978    
cufflinks 4.43587 0.0 14.7689   Low
cufflinks 6.27315 0.0 19.7409    
cufflinks 7.98773 0.0 23.9737    
cufflinks 4.93797 0.0 16.0018    
cufflinks 5.53936 0.0 17.6506    
cufflinks 7.02556 0.0 21.6843    
cufflinks 6.96115 0.0 21.4487    
cufflinks 3.918        
cufflinks 5.513     High  
cufflinks 4.575        
cufflinks 2.406       Low
cufflinks 3.08       Low
cufflinks 6.695     High  
cufflinks 6.914        
cufflinks 3.358       Low
cufflinks 5.209        
cufflinks 4.22        
cufflinks 7.853     High High
cufflinks 5.992     High  
cufflinks 8.756     High High
cufflinks 4.722        
cufflinks 6.78     High  
cufflinks 7.197     High  
cufflinks 5.034        

0 Strain