Gene : Glyma.08G074000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21649//PTHR21649:SF28 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  740
Name:  ? Glyma.08G074000 Secondary Identifier:  ? PAC:30538663
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G074000 0.5kb upstream 0.5kb upstream 1898 true Chr08: 5651670-5653567 Glycine max
Glyma.08G074000 0.5kb upstream 0.5kb upstream 500 false Chr08: 5653068-5653567 Glycine max
Glyma.08G074000 0.5kb downstream 0.5kb downstream 1898 true Chr08: 5651170-5653067 Glycine max
Glyma.08G074000 0.5kb downstream 0.5kb downstream 500 false Chr08: 5651170-5651669 Glycine max
Glyma.08G074000 1.0kb upstream 1.0kb upstream 2398 true Chr08: 5651670-5654067 Glycine max
Glyma.08G074000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5653068-5654067 Glycine max
Glyma.08G074000 1.0kb downstream 1.0kb downstream 2398 true Chr08: 5650670-5653067 Glycine max
Glyma.08G074000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5650670-5651669 Glycine max
Glyma.08G074000 2.0kb upstream 2.0kb upstream 3398 true Chr08: 5651670-5655067 Glycine max
Glyma.08G074000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5653068-5655067 Glycine max
Glyma.08G074000 2.0kb downstream 2.0kb downstream 3398 true Chr08: 5649670-5653067 Glycine max
Glyma.08G074000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5649670-5651669 Glycine max
Glyma.08G074000 5.0kb upstream 5.0kb upstream 6398 true Chr08: 5651670-5658067 Glycine max
Glyma.08G074000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5653068-5658067 Glycine max
Glyma.08G074000 5.0kb downstream 5.0kb downstream 6398 true Chr08: 5646670-5653067 Glycine max
Glyma.08G074000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5646670-5651669 Glycine max
Glyma.08G074000 10.0kb upstream 10.0kb upstream 11398 true Chr08: 5651670-5663067 Glycine max
Glyma.08G074000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5653068-5663067 Glycine max
Glyma.08G074000 10.0kb downstream 10.0kb downstream 11398 true Chr08: 5641670-5653067 Glycine max
Glyma.08G074000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5641670-5651669 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311763 5265 Fabidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.8822 0.0 183.729 High  
cufflinks 161.159 0.0 509.441 High High
cufflinks 29.0356 0.0 77.4974 High  
cufflinks 76.6213 0.0 217.227 High  
cufflinks 8.64085 0.0 24.5266    
cufflinks 13.72 0.0 37.4068    
cufflinks 86.7634 0.0 250.13 High  
cufflinks 64.4564 0.0 179.543 High  
cufflinks 2.3807 0.0 8.03955   Low
cufflinks 119.642     High  
cufflinks 0.014     Low Low
cufflinks 60.296     High  
cufflinks 0.081     Low  
cufflinks 0.074        
cufflinks 0.137        
cufflinks 362.923     High High
cufflinks 0.034     Low Low
cufflinks 69.768     High  
cufflinks 160.605     High  
cufflinks 382.765     High High
cufflinks 0.05     Low  
cufflinks 409.914     High High
cufflinks 273.653     High  
cufflinks 0.029     Low Low
cufflinks 442.906     High High
cufflinks 0.027     Low Low

0 Strain