Gene : Glyma.08G074800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23088:SF26 - N-CARBAMOYLPUTRESCINE AMIDASE Genomic Order:  748
Name:  ? Glyma.08G074800 Secondary Identifier:  ? PAC:30540414
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-43 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G074800 0.5kb upstream 0.5kb upstream 4922 true Chr08: 5712966-5717887 Glycine max
Glyma.08G074800 0.5kb upstream 0.5kb upstream 500 false Chr08: 5712966-5713465 Glycine max
Glyma.08G074800 0.5kb downstream 0.5kb downstream 4922 true Chr08: 5713466-5718387 Glycine max
Glyma.08G074800 0.5kb downstream 0.5kb downstream 500 false Chr08: 5717888-5718387 Glycine max
Glyma.08G074800 1.0kb upstream 1.0kb upstream 5422 true Chr08: 5712466-5717887 Glycine max
Glyma.08G074800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5712466-5713465 Glycine max
Glyma.08G074800 1.0kb downstream 1.0kb downstream 5422 true Chr08: 5713466-5718887 Glycine max
Glyma.08G074800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5717888-5718887 Glycine max
Glyma.08G074800 2.0kb upstream 2.0kb upstream 6422 true Chr08: 5711466-5717887 Glycine max
Glyma.08G074800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5711466-5713465 Glycine max
Glyma.08G074800 2.0kb downstream 2.0kb downstream 6422 true Chr08: 5713466-5719887 Glycine max
Glyma.08G074800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5717888-5719887 Glycine max
Glyma.08G074800 5.0kb upstream 5.0kb upstream 9422 true Chr08: 5708466-5717887 Glycine max
Glyma.08G074800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5708466-5713465 Glycine max
Glyma.08G074800 5.0kb downstream 5.0kb downstream 9422 true Chr08: 5713466-5722887 Glycine max
Glyma.08G074800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5717888-5722887 Glycine max
Glyma.08G074800 10.0kb upstream 10.0kb upstream 14422 true Chr08: 5703466-5717887 Glycine max
Glyma.08G074800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5703466-5713465 Glycine max
Glyma.08G074800 10.0kb downstream 10.0kb downstream 14422 true Chr08: 5713466-5727887 Glycine max
Glyma.08G074800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5717888-5727887 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303763 5265 Fabidae View MSA
124064750 5270 Rosid View MSA
123740883 5271 Pentapetalae View MSA
122790210 5272 Eudicot View MSA
122048045 5273 Angiosperm View MSA
121345187 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5952 0.0 29.3974    
cufflinks 7.362 0.0 21.2492   Low
cufflinks 13.0468 0.0 35.4888   High
cufflinks 8.89182 0.0 25.0462    
cufflinks 6.96867 0.0 20.2471   Low
cufflinks 11.4495 0.0 31.5683    
cufflinks 10.2066 0.0 28.4272    
cufflinks 8.64897 0.0 24.4706    
cufflinks 9.84359 0.0 27.4932    
cufflinks 1.667        
cufflinks 1.557        
cufflinks 3.259       High
cufflinks 3.162       High
cufflinks 2.454        
cufflinks 1.637        
cufflinks 2.149        
cufflinks 1.411       Low
cufflinks 4.005       High
cufflinks 2.059        
cufflinks 2.474        
cufflinks 1.277       Low
cufflinks 2.486        
cufflinks 2.172        
cufflinks 1.995        
cufflinks 2.31        
cufflinks 1.548        

0 Strain