Gene : Glyma.08G074900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31827:SF1 - EMB Genomic Order:  749
Name:  ? Glyma.08G074900 Secondary Identifier:  ? PAC:30539415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G074900 0.5kb upstream 0.5kb upstream 5776 true Chr08: 5729601-5735376 Glycine max
Glyma.08G074900 0.5kb upstream 0.5kb upstream 500 false Chr08: 5729601-5730100 Glycine max
Glyma.08G074900 0.5kb downstream 0.5kb downstream 5776 true Chr08: 5730101-5735876 Glycine max
Glyma.08G074900 0.5kb downstream 0.5kb downstream 500 false Chr08: 5735377-5735876 Glycine max
Glyma.08G074900 1.0kb upstream 1.0kb upstream 6276 true Chr08: 5729101-5735376 Glycine max
Glyma.08G074900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5729101-5730100 Glycine max
Glyma.08G074900 1.0kb downstream 1.0kb downstream 6276 true Chr08: 5730101-5736376 Glycine max
Glyma.08G074900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5735377-5736376 Glycine max
Glyma.08G074900 2.0kb upstream 2.0kb upstream 7276 true Chr08: 5728101-5735376 Glycine max
Glyma.08G074900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5728101-5730100 Glycine max
Glyma.08G074900 2.0kb downstream 2.0kb downstream 7276 true Chr08: 5730101-5737376 Glycine max
Glyma.08G074900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5735377-5737376 Glycine max
Glyma.08G074900 5.0kb upstream 5.0kb upstream 10276 true Chr08: 5725101-5735376 Glycine max
Glyma.08G074900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5725101-5730100 Glycine max
Glyma.08G074900 5.0kb downstream 5.0kb downstream 10276 true Chr08: 5730101-5740376 Glycine max
Glyma.08G074900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5735377-5740376 Glycine max
Glyma.08G074900 10.0kb upstream 10.0kb upstream 15276 true Chr08: 5720101-5735376 Glycine max
Glyma.08G074900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5720101-5730100 Glycine max
Glyma.08G074900 10.0kb downstream 10.0kb downstream 15276 true Chr08: 5730101-5745376 Glycine max
Glyma.08G074900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5735377-5745376 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041326 5273 Angiosperm View MSA
122299950 5265 Fabidae View MSA
124067147 5270 Rosid View MSA
123737045 5271 Pentapetalae View MSA
122789501 5272 Eudicot View MSA
121351095 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1749 0.0 89.8806 High  
cufflinks 19.7625 0.0 63.3823    
cufflinks 20.4093 0.0 66.5111 High  
cufflinks 18.2311 0.0 57.933    
cufflinks 19.2836 0.0 61.902    
cufflinks 26.3795 0.0 90.7235 High  
cufflinks 11.7149 0.0 35.2657   Low
cufflinks 44.7467 0.0 142.103 High High
cufflinks 34.1046 0.0 125.805 High High
cufflinks 25.82     High High
cufflinks 12.142     High  
cufflinks 15.771     High  
cufflinks 10.735     High Low
cufflinks 7.323     High Low
cufflinks 10.591     High Low
cufflinks 16.217     High  
cufflinks 17.518     High  
cufflinks 22.118     High High
cufflinks 19.926     High  
cufflinks 15.47     High  
cufflinks 9.862     High Low
cufflinks 22.302     High High
cufflinks 18.688     High  
cufflinks 16.288     High  
cufflinks 16.644     High  
cufflinks 12.254     High  

0 Strain