Gene : Glyma.08G075600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  756
Name:  ? Glyma.08G075600 Secondary Identifier:  ? PAC:30540114
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6829 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G075600 0.5kb upstream 0.5kb upstream 4150 true Chr08: 5784253-5788402 Glycine max
Glyma.08G075600 0.5kb upstream 0.5kb upstream 500 false Chr08: 5787903-5788402 Glycine max
Glyma.08G075600 0.5kb downstream 0.5kb downstream 4150 true Chr08: 5783753-5787902 Glycine max
Glyma.08G075600 0.5kb downstream 0.5kb downstream 500 false Chr08: 5783753-5784252 Glycine max
Glyma.08G075600 1.0kb upstream 1.0kb upstream 4650 true Chr08: 5784253-5788902 Glycine max
Glyma.08G075600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5787903-5788902 Glycine max
Glyma.08G075600 1.0kb downstream 1.0kb downstream 4650 true Chr08: 5783253-5787902 Glycine max
Glyma.08G075600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5783253-5784252 Glycine max
Glyma.08G075600 2.0kb upstream 2.0kb upstream 5650 true Chr08: 5784253-5789902 Glycine max
Glyma.08G075600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5787903-5789902 Glycine max
Glyma.08G075600 2.0kb downstream 2.0kb downstream 5650 true Chr08: 5782253-5787902 Glycine max
Glyma.08G075600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5782253-5784252 Glycine max
Glyma.08G075600 5.0kb upstream 5.0kb upstream 8650 true Chr08: 5784253-5792902 Glycine max
Glyma.08G075600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5787903-5792902 Glycine max
Glyma.08G075600 5.0kb downstream 5.0kb downstream 8650 true Chr08: 5779253-5787902 Glycine max
Glyma.08G075600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5779253-5784252 Glycine max
Glyma.08G075600 10.0kb upstream 10.0kb upstream 13650 true Chr08: 5784253-5797902 Glycine max
Glyma.08G075600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5787903-5797902 Glycine max
Glyma.08G075600 10.0kb downstream 10.0kb downstream 13650 true Chr08: 5774253-5787902 Glycine max
Glyma.08G075600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5774253-5784252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304995 5265 Fabidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.03191 0.0 14.4288    
cufflinks 3.9274 0.0 11.6232    
cufflinks 1.60249 0.0 5.35491   Low
cufflinks 5.26098 0.0 14.9841    
cufflinks 3.74456 0.0 11.1424    
cufflinks 1.8883 0.0 6.18537   Low
cufflinks 8.54779 0.0 23.3286   High
cufflinks 3.50853 0.0 10.5245    
cufflinks 3.70857 0.0 11.0395    
cufflinks 0.848        
cufflinks 0.276       Low
cufflinks 1.95       High
cufflinks 2.199       High
cufflinks 3.111       High
cufflinks 0.555        
cufflinks 0.819        
cufflinks 0.81        
cufflinks 1.752        
cufflinks 2.52       High
cufflinks 0.425       Low
cufflinks 0.468        
cufflinks 0.739        
cufflinks 1.372        
cufflinks 0.396       Low
cufflinks 0.656        
cufflinks 0.451        

0 Strain