Gene : Glyma.08G066500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31422:SF2 - T10O22.23 Genomic Order:  665
Name:  ? Glyma.08G066500 Secondary Identifier:  ? PAC:30540003
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G066500 0.5kb upstream 0.5kb upstream 1687 true Chr08: 5100691-5102377 Glycine max
Glyma.08G066500 0.5kb upstream 0.5kb upstream 500 false Chr08: 5100691-5101190 Glycine max
Glyma.08G066500 0.5kb downstream 0.5kb downstream 1687 true Chr08: 5101191-5102877 Glycine max
Glyma.08G066500 0.5kb downstream 0.5kb downstream 500 false Chr08: 5102378-5102877 Glycine max
Glyma.08G066500 1.0kb upstream 1.0kb upstream 2187 true Chr08: 5100191-5102377 Glycine max
Glyma.08G066500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5100191-5101190 Glycine max
Glyma.08G066500 1.0kb downstream 1.0kb downstream 2187 true Chr08: 5101191-5103377 Glycine max
Glyma.08G066500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5102378-5103377 Glycine max
Glyma.08G066500 2.0kb upstream 2.0kb upstream 3187 true Chr08: 5099191-5102377 Glycine max
Glyma.08G066500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5099191-5101190 Glycine max
Glyma.08G066500 2.0kb downstream 2.0kb downstream 3187 true Chr08: 5101191-5104377 Glycine max
Glyma.08G066500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5102378-5104377 Glycine max
Glyma.08G066500 5.0kb upstream 5.0kb upstream 6187 true Chr08: 5096191-5102377 Glycine max
Glyma.08G066500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5096191-5101190 Glycine max
Glyma.08G066500 5.0kb downstream 5.0kb downstream 6187 true Chr08: 5101191-5107377 Glycine max
Glyma.08G066500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5102378-5107377 Glycine max
Glyma.08G066500 10.0kb upstream 10.0kb upstream 11187 true Chr08: 5091191-5102377 Glycine max
Glyma.08G066500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5091191-5101190 Glycine max
Glyma.08G066500 10.0kb downstream 10.0kb downstream 11187 true Chr08: 5101191-5112377 Glycine max
Glyma.08G066500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5102378-5112377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312795 5265 Fabidae View MSA
124066206 5270 Rosid View MSA
123739479 5271 Pentapetalae View MSA
122793860 5272 Eudicot View MSA
122044411 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.811388 0.0 2.95807    
cufflinks 0.423389 0.0 1.5978    
cufflinks 2.72438 0.0 8.97204   High
cufflinks 0.497663 0.0 1.86381    
cufflinks 0.216178 0.0 0.837555 Low  
cufflinks 0.0887813 0.0 0.356408 Low Low
cufflinks 1.02627 0.0 3.68314    
cufflinks 0.220401 0.0 0.855271 Low  
cufflinks 0.265328 0.0 1.02056    
cufflinks 0.09     Low  
cufflinks 0.097        
cufflinks 0.54       High
cufflinks 0.104        
cufflinks 0.241        
cufflinks 0.097        
cufflinks 0.127        
cufflinks 0.246        
cufflinks 2.472       High
cufflinks 0.223        
cufflinks 0.09     Low  
cufflinks 0.1        
cufflinks 0.146        
cufflinks 0.212        
cufflinks 0.08        
cufflinks 0.129        
cufflinks 0.069        

0 Strain