Gene : Glyma.08G066600 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.2.1.27 - Methylmalonate-semialdehyde dehydrogenase (CoA acylating) / MSDH Genomic Order:  666
Name:  ? Glyma.08G066600 Secondary Identifier:  ? PAC:30538675
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G066600 0.5kb upstream 0.5kb upstream 8785 true Chr08: 5104311-5113095 Glycine max
Glyma.08G066600 0.5kb upstream 0.5kb upstream 500 false Chr08: 5104311-5104810 Glycine max
Glyma.08G066600 0.5kb downstream 0.5kb downstream 8785 true Chr08: 5104811-5113595 Glycine max
Glyma.08G066600 0.5kb downstream 0.5kb downstream 500 false Chr08: 5113096-5113595 Glycine max
Glyma.08G066600 1.0kb upstream 1.0kb upstream 9285 true Chr08: 5103811-5113095 Glycine max
Glyma.08G066600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5103811-5104810 Glycine max
Glyma.08G066600 1.0kb downstream 1.0kb downstream 9285 true Chr08: 5104811-5114095 Glycine max
Glyma.08G066600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5113096-5114095 Glycine max
Glyma.08G066600 2.0kb upstream 2.0kb upstream 10285 true Chr08: 5102811-5113095 Glycine max
Glyma.08G066600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5102811-5104810 Glycine max
Glyma.08G066600 2.0kb downstream 2.0kb downstream 10285 true Chr08: 5104811-5115095 Glycine max
Glyma.08G066600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5113096-5115095 Glycine max
Glyma.08G066600 5.0kb upstream 5.0kb upstream 13285 true Chr08: 5099811-5113095 Glycine max
Glyma.08G066600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5099811-5104810 Glycine max
Glyma.08G066600 5.0kb downstream 5.0kb downstream 13285 true Chr08: 5104811-5118095 Glycine max
Glyma.08G066600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5113096-5118095 Glycine max
Glyma.08G066600 10.0kb upstream 10.0kb upstream 18285 true Chr08: 5094811-5113095 Glycine max
Glyma.08G066600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5094811-5104810 Glycine max
Glyma.08G066600 10.0kb downstream 10.0kb downstream 18285 true Chr08: 5104811-5123095 Glycine max
Glyma.08G066600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5113096-5123095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302909 5265 Fabidae View MSA
124063122 5270 Rosid View MSA
123738991 5271 Pentapetalae View MSA
122791664 5272 Eudicot View MSA
122044147 5273 Angiosperm View MSA
121345604 5274 Embryophyte View MSA
123424668 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7211 0.0 62.0943    
cufflinks 8.97414 0.0 37.0552   Low
cufflinks 29.5757 0.0 114.664 High High
cufflinks 12.0638 0.0 41.3151    
cufflinks 18.7856 0.0 76.1416    
cufflinks 31.9121 0.0 102.421 High High
cufflinks 19.9209 0.0 69.2383    
cufflinks 6.4017 0.0 23.5466   Low
cufflinks 22.9007 0.0 93.6706 High  
cufflinks 0.903       Low
cufflinks 4.665       High
cufflinks 2.279        
cufflinks 2.656        
cufflinks 2.675        
cufflinks 2.051        
cufflinks 0.924       Low
cufflinks 1.475        
cufflinks 1.235        
cufflinks 1.359        
cufflinks 1.219        
cufflinks 2.975        
cufflinks 0.966        
cufflinks 0.659       Low
cufflinks 3.974       High
cufflinks 1.038        
cufflinks 2.527        

0 Strain