Gene : Glyma.08G066700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12300//PTHR12300:SF43 - HVA22-LIKE PROTEINS Genomic Order:  667
Name:  ? Glyma.08G066700 Secondary Identifier:  ? PAC:30537606
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G066700 0.5kb upstream 0.5kb upstream 4078 true Chr08: 5114132-5118209 Glycine max
Glyma.08G066700 0.5kb upstream 0.5kb upstream 500 false Chr08: 5117710-5118209 Glycine max
Glyma.08G066700 0.5kb downstream 0.5kb downstream 4078 true Chr08: 5113632-5117709 Glycine max
Glyma.08G066700 0.5kb downstream 0.5kb downstream 500 false Chr08: 5113632-5114131 Glycine max
Glyma.08G066700 1.0kb upstream 1.0kb upstream 4578 true Chr08: 5114132-5118709 Glycine max
Glyma.08G066700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5117710-5118709 Glycine max
Glyma.08G066700 1.0kb downstream 1.0kb downstream 4578 true Chr08: 5113132-5117709 Glycine max
Glyma.08G066700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5113132-5114131 Glycine max
Glyma.08G066700 2.0kb upstream 2.0kb upstream 5578 true Chr08: 5114132-5119709 Glycine max
Glyma.08G066700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5117710-5119709 Glycine max
Glyma.08G066700 2.0kb downstream 2.0kb downstream 5578 true Chr08: 5112132-5117709 Glycine max
Glyma.08G066700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5112132-5114131 Glycine max
Glyma.08G066700 5.0kb upstream 5.0kb upstream 8578 true Chr08: 5114132-5122709 Glycine max
Glyma.08G066700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5117710-5122709 Glycine max
Glyma.08G066700 5.0kb downstream 5.0kb downstream 8578 true Chr08: 5109132-5117709 Glycine max
Glyma.08G066700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5109132-5114131 Glycine max
Glyma.08G066700 10.0kb upstream 10.0kb upstream 13578 true Chr08: 5114132-5127709 Glycine max
Glyma.08G066700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5117710-5127709 Glycine max
Glyma.08G066700 10.0kb downstream 10.0kb downstream 13578 true Chr08: 5104132-5117709 Glycine max
Glyma.08G066700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5104132-5114131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311964 5265 Fabidae View MSA
124074619 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.26848 0.0 25.623    
cufflinks 5.79411 0.0 16.8025    
cufflinks 11.5902 0.0 31.4495   High
cufflinks 7.34843 0.0 20.692    
cufflinks 4.98162 0.0 14.7699    
cufflinks 11.3518 0.0 30.9065   High
cufflinks 2.61465 0.0 8.50176   Low
cufflinks 5.65852 0.0 16.4209    
cufflinks 5.79756 0.0 16.82    
cufflinks 5.382        
cufflinks 8.297     High High
cufflinks 5.435        
cufflinks 5.55        
cufflinks 3.741        
cufflinks 4.0        
cufflinks 5.704        
cufflinks 2.862       Low
cufflinks 4.454        
cufflinks 3.687        
cufflinks 3.318       Low
cufflinks 7.668     High High
cufflinks 4.374        
cufflinks 4.209        
cufflinks 7.94     High High
cufflinks 3.292       Low
cufflinks 5.359        

0 Strain