Gene : Glyma.08G067400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10288:SF173 - RNA-BINDING KH DOMAIN-CONTAINING PROTEIN Genomic Order:  674
Name:  ? Glyma.08G067400 Secondary Identifier:  ? PAC:30540342
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G067400 0.5kb upstream 0.5kb upstream 6554 true Chr08: 5172492-5179045 Glycine max
Glyma.08G067400 0.5kb upstream 0.5kb upstream 500 false Chr08: 5178546-5179045 Glycine max
Glyma.08G067400 0.5kb downstream 0.5kb downstream 6554 true Chr08: 5171992-5178545 Glycine max
Glyma.08G067400 0.5kb downstream 0.5kb downstream 500 false Chr08: 5171992-5172491 Glycine max
Glyma.08G067400 1.0kb upstream 1.0kb upstream 7054 true Chr08: 5172492-5179545 Glycine max
Glyma.08G067400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5178546-5179545 Glycine max
Glyma.08G067400 1.0kb downstream 1.0kb downstream 7054 true Chr08: 5171492-5178545 Glycine max
Glyma.08G067400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5171492-5172491 Glycine max
Glyma.08G067400 2.0kb upstream 2.0kb upstream 8054 true Chr08: 5172492-5180545 Glycine max
Glyma.08G067400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5178546-5180545 Glycine max
Glyma.08G067400 2.0kb downstream 2.0kb downstream 8054 true Chr08: 5170492-5178545 Glycine max
Glyma.08G067400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5170492-5172491 Glycine max
Glyma.08G067400 5.0kb upstream 5.0kb upstream 11054 true Chr08: 5172492-5183545 Glycine max
Glyma.08G067400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5178546-5183545 Glycine max
Glyma.08G067400 5.0kb downstream 5.0kb downstream 11054 true Chr08: 5167492-5178545 Glycine max
Glyma.08G067400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5167492-5172491 Glycine max
Glyma.08G067400 10.0kb upstream 10.0kb upstream 16054 true Chr08: 5172492-5188545 Glycine max
Glyma.08G067400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5178546-5188545 Glycine max
Glyma.08G067400 10.0kb downstream 10.0kb downstream 16054 true Chr08: 5162492-5178545 Glycine max
Glyma.08G067400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5162492-5172491 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315220 5265 Fabidae View MSA
124070518 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.8094 0.0 31.4571    
cufflinks 5.77994 0.0 25.9232    
cufflinks 10.8618 0.0 46.3041   High
cufflinks 4.07913 0.0 20.324    
cufflinks 5.53063 0.0 23.1356    
cufflinks 4.9965 0.0 22.7912    
cufflinks 5.38965 0.0 22.6248    
cufflinks 3.9884 0.0 19.8819   Low
cufflinks 4.65414 0.0 22.4379    
cufflinks 0.486       Low
cufflinks 2.41       High
cufflinks 0.988        
cufflinks 0.667        
cufflinks 0.823        
cufflinks 1.71       High
cufflinks 0.83        
cufflinks 0.801        
cufflinks 0.734        
cufflinks 0.893        
cufflinks 0.839        
cufflinks 1.266        
cufflinks 0.824        
cufflinks 0.821        
cufflinks 1.555       High
cufflinks 0.74        
cufflinks 1.001        

0 Strain