Gene : Glyma.08G068200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  682
Name:  ? Glyma.08G068200 Secondary Identifier:  ? PAC:30536921
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G068200 0.5kb upstream 0.5kb upstream 10852 true Chr08: 5223828-5234679 Glycine max
Glyma.08G068200 0.5kb upstream 0.5kb upstream 500 false Chr08: 5234180-5234679 Glycine max
Glyma.08G068200 0.5kb downstream 0.5kb downstream 10852 true Chr08: 5223328-5234179 Glycine max
Glyma.08G068200 0.5kb downstream 0.5kb downstream 500 false Chr08: 5223328-5223827 Glycine max
Glyma.08G068200 1.0kb upstream 1.0kb upstream 11352 true Chr08: 5223828-5235179 Glycine max
Glyma.08G068200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5234180-5235179 Glycine max
Glyma.08G068200 1.0kb downstream 1.0kb downstream 11352 true Chr08: 5222828-5234179 Glycine max
Glyma.08G068200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5222828-5223827 Glycine max
Glyma.08G068200 2.0kb upstream 2.0kb upstream 12352 true Chr08: 5223828-5236179 Glycine max
Glyma.08G068200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5234180-5236179 Glycine max
Glyma.08G068200 2.0kb downstream 2.0kb downstream 12352 true Chr08: 5221828-5234179 Glycine max
Glyma.08G068200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5221828-5223827 Glycine max
Glyma.08G068200 5.0kb upstream 5.0kb upstream 15352 true Chr08: 5223828-5239179 Glycine max
Glyma.08G068200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5234180-5239179 Glycine max
Glyma.08G068200 5.0kb downstream 5.0kb downstream 15352 true Chr08: 5218828-5234179 Glycine max
Glyma.08G068200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5218828-5223827 Glycine max
Glyma.08G068200 10.0kb upstream 10.0kb upstream 20352 true Chr08: 5223828-5244179 Glycine max
Glyma.08G068200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5234180-5244179 Glycine max
Glyma.08G068200 10.0kb downstream 10.0kb downstream 20352 true Chr08: 5213828-5234179 Glycine max
Glyma.08G068200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5213828-5223827 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296327 5265 Fabidae View MSA
124040371 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.2538 0.0 118.127 High High
cufflinks 19.5115 0.0 98.5751   High
cufflinks 1.96666 0.0 14.9977    
cufflinks 5.79092 0.0 31.1545    
cufflinks 1.48193 0.0 12.1835    
cufflinks 0.804957 0.0 6.37229    
cufflinks 0.306178 0.0 1.19292   Low
cufflinks 3.40703 0.0 21.8785    
cufflinks 1.47025 0.0 10.1096    
cufflinks 0.338        
cufflinks 0.354        
cufflinks 0.033     Low  
cufflinks 0.005     Low Low
cufflinks 0.001     Low Low
cufflinks 0.045     Low  
cufflinks 0.72        
cufflinks 0.098        
cufflinks 0.019     Low Low
cufflinks 0.659        
cufflinks 0.607        
cufflinks 0.318        
cufflinks 0.557        
cufflinks 0.985        
cufflinks 0.185        
cufflinks 0.553        
cufflinks 0.371        

0 Strain