Gene : Glyma.08G070200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33735:SF4 - EXPRESSED PROTEIN Genomic Order:  702
Name:  ? Glyma.08G070200 Secondary Identifier:  ? PAC:30541180
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G070200 0.5kb upstream 0.5kb upstream 2658 true Chr08: 5346609-5349266 Glycine max
Glyma.08G070200 0.5kb upstream 0.5kb upstream 500 false Chr08: 5346609-5347108 Glycine max
Glyma.08G070200 0.5kb downstream 0.5kb downstream 2658 true Chr08: 5347109-5349766 Glycine max
Glyma.08G070200 0.5kb downstream 0.5kb downstream 500 false Chr08: 5349267-5349766 Glycine max
Glyma.08G070200 1.0kb upstream 1.0kb upstream 3158 true Chr08: 5346109-5349266 Glycine max
Glyma.08G070200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5346109-5347108 Glycine max
Glyma.08G070200 1.0kb downstream 1.0kb downstream 3158 true Chr08: 5347109-5350266 Glycine max
Glyma.08G070200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5349267-5350266 Glycine max
Glyma.08G070200 2.0kb upstream 2.0kb upstream 4158 true Chr08: 5345109-5349266 Glycine max
Glyma.08G070200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5345109-5347108 Glycine max
Glyma.08G070200 2.0kb downstream 2.0kb downstream 4158 true Chr08: 5347109-5351266 Glycine max
Glyma.08G070200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5349267-5351266 Glycine max
Glyma.08G070200 5.0kb upstream 5.0kb upstream 7158 true Chr08: 5342109-5349266 Glycine max
Glyma.08G070200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5342109-5347108 Glycine max
Glyma.08G070200 5.0kb downstream 5.0kb downstream 7158 true Chr08: 5347109-5354266 Glycine max
Glyma.08G070200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5349267-5354266 Glycine max
Glyma.08G070200 10.0kb upstream 10.0kb upstream 12158 true Chr08: 5337109-5349266 Glycine max
Glyma.08G070200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5337109-5347108 Glycine max
Glyma.08G070200 10.0kb downstream 10.0kb downstream 12158 true Chr08: 5347109-5359266 Glycine max
Glyma.08G070200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5349267-5359266 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028643 5273 Angiosperm View MSA
122303913 5265 Fabidae View MSA
124066096 5270 Rosid View MSA
123741329 5271 Pentapetalae View MSA
122796561 5272 Eudicot View MSA
121298100 5274 Embryophyte View MSA
123336097 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.289002 0.0 1.12504    
cufflinks 0.214094 0.0 0.84264 Low Low
cufflinks 15.1958 0.0 54.6273   High
cufflinks 0.222999 0.0 0.875371   Low
cufflinks 0.439441 0.0 2.18657    
cufflinks 4.85407 0.0 20.6707   High
cufflinks 1.2267 0.0 7.31191    
cufflinks 1.52373 0.0 9.01783    
cufflinks 1.03062 0.0 6.51219    
cufflinks 0.319        
cufflinks 0.738        
cufflinks 1.908       High
cufflinks 0.734        
cufflinks 0.189        
cufflinks 0.052     Low Low
cufflinks 0.13        
cufflinks 0.167        
cufflinks 0.933       High
cufflinks 0.132        
cufflinks 0.18        
cufflinks 0.268        
cufflinks 0.246        
cufflinks 0.155        
cufflinks 1.085       High
cufflinks 0.16        
cufflinks 0.527        

0 Strain