Gene : Glyma.08G070400 G. max Wm82.a2.v1
Defline:  (1 of 7) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  704
Name:  ? Glyma.08G070400 Secondary Identifier:  ? PAC:30536055
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax RIBOSYN2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G070400 0.5kb upstream 0.5kb upstream 4851 true Chr08: 5356040-5360890 Glycine max
Glyma.08G070400 0.5kb upstream 0.5kb upstream 500 false Chr08: 5360391-5360890 Glycine max
Glyma.08G070400 0.5kb downstream 0.5kb downstream 4851 true Chr08: 5355540-5360390 Glycine max
Glyma.08G070400 0.5kb downstream 0.5kb downstream 500 false Chr08: 5355540-5356039 Glycine max
Glyma.08G070400 1.0kb upstream 1.0kb upstream 5351 true Chr08: 5356040-5361390 Glycine max
Glyma.08G070400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5360391-5361390 Glycine max
Glyma.08G070400 1.0kb downstream 1.0kb downstream 5351 true Chr08: 5355040-5360390 Glycine max
Glyma.08G070400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5355040-5356039 Glycine max
Glyma.08G070400 2.0kb upstream 2.0kb upstream 6351 true Chr08: 5356040-5362390 Glycine max
Glyma.08G070400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5360391-5362390 Glycine max
Glyma.08G070400 2.0kb downstream 2.0kb downstream 6351 true Chr08: 5354040-5360390 Glycine max
Glyma.08G070400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5354040-5356039 Glycine max
Glyma.08G070400 5.0kb upstream 5.0kb upstream 9351 true Chr08: 5356040-5365390 Glycine max
Glyma.08G070400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5360391-5365390 Glycine max
Glyma.08G070400 5.0kb downstream 5.0kb downstream 9351 true Chr08: 5351040-5360390 Glycine max
Glyma.08G070400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5351040-5356039 Glycine max
Glyma.08G070400 10.0kb upstream 10.0kb upstream 14351 true Chr08: 5356040-5370390 Glycine max
Glyma.08G070400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5360391-5370390 Glycine max
Glyma.08G070400 10.0kb downstream 10.0kb downstream 14351 true Chr08: 5346040-5360390 Glycine max
Glyma.08G070400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5346040-5356039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.31687 0.0 9.82296    
cufflinks 2.66765 0.0 8.15983    
cufflinks 2.21946 0.0 6.92938   Low
cufflinks 3.68591 0.0 10.7699    
cufflinks 5.05167 0.0 14.2361    
cufflinks 2.43985 0.0 7.54699    
cufflinks 3.1942 0.0 9.52689    
cufflinks 3.58149 0.0 10.5153    
cufflinks 10.2479 0.0 27.4979   High
cufflinks 2.212        
cufflinks 0.351       Low
cufflinks 2.276        
cufflinks 2.218        
cufflinks 2.814        
cufflinks 4.572       High
cufflinks 3.084        
cufflinks 0.653       Low
cufflinks 2.53        
cufflinks 2.131        
cufflinks 2.617        
cufflinks 0.507       Low
cufflinks 2.568        
cufflinks 2.978        
cufflinks 0.544       Low
cufflinks 2.741        
cufflinks 0.577       Low

0 Strain