Gene : Glyma.08G071300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31279:SF12 - PHI-1-LIKE PROTEIN Genomic Order:  713
Name:  ? Glyma.08G071300 Secondary Identifier:  ? PAC:30541404
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G071300 0.5kb upstream 0.5kb upstream 2682 true Chr08: 5453068-5455749 Glycine max
Glyma.08G071300 0.5kb upstream 0.5kb upstream 500 false Chr08: 5455250-5455749 Glycine max
Glyma.08G071300 0.5kb downstream 0.5kb downstream 2682 true Chr08: 5452568-5455249 Glycine max
Glyma.08G071300 0.5kb downstream 0.5kb downstream 500 false Chr08: 5452568-5453067 Glycine max
Glyma.08G071300 1.0kb upstream 1.0kb upstream 3182 true Chr08: 5453068-5456249 Glycine max
Glyma.08G071300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5455250-5456249 Glycine max
Glyma.08G071300 1.0kb downstream 1.0kb downstream 3182 true Chr08: 5452068-5455249 Glycine max
Glyma.08G071300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5452068-5453067 Glycine max
Glyma.08G071300 2.0kb upstream 2.0kb upstream 4182 true Chr08: 5453068-5457249 Glycine max
Glyma.08G071300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5455250-5457249 Glycine max
Glyma.08G071300 2.0kb downstream 2.0kb downstream 4182 true Chr08: 5451068-5455249 Glycine max
Glyma.08G071300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5451068-5453067 Glycine max
Glyma.08G071300 5.0kb upstream 5.0kb upstream 7182 true Chr08: 5453068-5460249 Glycine max
Glyma.08G071300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5455250-5460249 Glycine max
Glyma.08G071300 5.0kb downstream 5.0kb downstream 7182 true Chr08: 5448068-5455249 Glycine max
Glyma.08G071300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5448068-5453067 Glycine max
Glyma.08G071300 10.0kb upstream 10.0kb upstream 12182 true Chr08: 5453068-5465249 Glycine max
Glyma.08G071300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5455250-5465249 Glycine max
Glyma.08G071300 10.0kb downstream 10.0kb downstream 12182 true Chr08: 5443068-5455249 Glycine max
Glyma.08G071300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5443068-5453067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791521 5272 Eudicot View MSA
122304437 5265 Fabidae View MSA
124070844 5270 Rosid View MSA
123746881 5271 Pentapetalae View MSA
122046838 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.1602 0.0 242.081 High High
cufflinks 7.28695 0.0 20.114   Low
cufflinks 131.121 0.0 439.783 High High
cufflinks 26.7854 0.0 72.3753 High  
cufflinks 18.7643 0.0 50.1321    
cufflinks 36.6245 0.0 101.363 High  
cufflinks 20.9699 0.0 56.1457    
cufflinks 12.4657 0.0 33.4156    
cufflinks 22.9202 0.0 61.5189 High  
cufflinks 22.296     High  
cufflinks 124.921     High High
cufflinks 83.297     High  
cufflinks 31.245     High  
cufflinks 6.933     High Low
cufflinks 258.066     High High
cufflinks 24.345     High  
cufflinks 171.511     High High
cufflinks 18.132     High  
cufflinks 13.323     High  
cufflinks 24.559     High  
cufflinks 187.87     High High
cufflinks 12.414     High Low
cufflinks 13.042     High Low
cufflinks 90.58     High  
cufflinks 22.5     High  
cufflinks 94.705     High  

0 Strain