Gene : Glyma.08G071700 G. max Wm82.a2.v1
Defline:  (1 of 14) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  717
Name:  ? Glyma.08G071700 Secondary Identifier:  ? PAC:30535917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G071700 0.5kb upstream 0.5kb upstream 7518 true Chr08: 5486278-5493795 Glycine max
Glyma.08G071700 0.5kb upstream 0.5kb upstream 500 false Chr08: 5493296-5493795 Glycine max
Glyma.08G071700 0.5kb downstream 0.5kb downstream 7518 true Chr08: 5485778-5493295 Glycine max
Glyma.08G071700 0.5kb downstream 0.5kb downstream 500 false Chr08: 5485778-5486277 Glycine max
Glyma.08G071700 1.0kb upstream 1.0kb upstream 8018 true Chr08: 5486278-5494295 Glycine max
Glyma.08G071700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5493296-5494295 Glycine max
Glyma.08G071700 1.0kb downstream 1.0kb downstream 8018 true Chr08: 5485278-5493295 Glycine max
Glyma.08G071700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5485278-5486277 Glycine max
Glyma.08G071700 2.0kb upstream 2.0kb upstream 9018 true Chr08: 5486278-5495295 Glycine max
Glyma.08G071700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5493296-5495295 Glycine max
Glyma.08G071700 2.0kb downstream 2.0kb downstream 9018 true Chr08: 5484278-5493295 Glycine max
Glyma.08G071700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5484278-5486277 Glycine max
Glyma.08G071700 5.0kb upstream 5.0kb upstream 12018 true Chr08: 5486278-5498295 Glycine max
Glyma.08G071700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5493296-5498295 Glycine max
Glyma.08G071700 5.0kb downstream 5.0kb downstream 12018 true Chr08: 5481278-5493295 Glycine max
Glyma.08G071700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5481278-5486277 Glycine max
Glyma.08G071700 10.0kb upstream 10.0kb upstream 17018 true Chr08: 5486278-5503295 Glycine max
Glyma.08G071700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5493296-5503295 Glycine max
Glyma.08G071700 10.0kb downstream 10.0kb downstream 17018 true Chr08: 5476278-5493295 Glycine max
Glyma.08G071700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5476278-5486277 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122311960 5265 Fabidae View MSA
124070963 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.328996 0.0 2.15786    
cufflinks 0.15285 0.0 1.24174 Low  
cufflinks 0.474101 0.0 2.82257    
cufflinks 0.051753 0.0 0.501009 Low Low
cufflinks 0.240068 0.0 1.19453    
cufflinks 0.0672827 0.0 0.270578 Low Low
cufflinks 0.0537433 0.0 0.525188 Low Low
cufflinks 0.369833 0.0 2.56964    
cufflinks 0.647669 0.0 3.73482   High
cufflinks 0.093     Low  
cufflinks 0.014     Low Low
cufflinks 0.223       High
cufflinks 0.177       High
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.038     Low  
cufflinks 0.089     Low  
cufflinks 0.123       High
cufflinks 0.019     Low  
cufflinks 0.026     Low  
cufflinks 0.023     Low  
cufflinks 0.023     Low  
cufflinks 0.012     Low Low
cufflinks 0.023     Low  
cufflinks 0.049     Low  

0 Strain