Gene : Glyma.08G072000 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  720
Name:  ? Glyma.08G072000 Secondary Identifier:  ? PAC:30540450
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.08G072000 0.5kb upstream 0.5kb upstream 4674 true Chr08: 5507478-5512151 Glycine max
Glyma.08G072000 0.5kb upstream 0.5kb upstream 500 false Chr08: 5507478-5507977 Glycine max
Glyma.08G072000 0.5kb downstream 0.5kb downstream 4674 true Chr08: 5507978-5512651 Glycine max
Glyma.08G072000 0.5kb downstream 0.5kb downstream 500 false Chr08: 5512152-5512651 Glycine max
Glyma.08G072000 1.0kb upstream 1.0kb upstream 5174 true Chr08: 5506978-5512151 Glycine max
Glyma.08G072000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5506978-5507977 Glycine max
Glyma.08G072000 1.0kb downstream 1.0kb downstream 5174 true Chr08: 5507978-5513151 Glycine max
Glyma.08G072000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5512152-5513151 Glycine max
Glyma.08G072000 2.0kb upstream 2.0kb upstream 6174 true Chr08: 5505978-5512151 Glycine max
Glyma.08G072000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5505978-5507977 Glycine max
Glyma.08G072000 2.0kb downstream 2.0kb downstream 6174 true Chr08: 5507978-5514151 Glycine max
Glyma.08G072000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5512152-5514151 Glycine max
Glyma.08G072000 5.0kb upstream 5.0kb upstream 9174 true Chr08: 5502978-5512151 Glycine max
Glyma.08G072000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5502978-5507977 Glycine max
Glyma.08G072000 5.0kb downstream 5.0kb downstream 9174 true Chr08: 5507978-5517151 Glycine max
Glyma.08G072000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5512152-5517151 Glycine max
Glyma.08G072000 10.0kb upstream 10.0kb upstream 14174 true Chr08: 5497978-5512151 Glycine max
Glyma.08G072000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5497978-5507977 Glycine max
Glyma.08G072000 10.0kb downstream 10.0kb downstream 14174 true Chr08: 5507978-5522151 Glycine max
Glyma.08G072000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5512152-5522151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301286 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.55572 0.0 23.4641    
cufflinks 3.61048 0.0 19.7007    
cufflinks 6.4914 0.0 34.1118    
cufflinks 14.4372 0.0 70.0903    
cufflinks 2.30533 0.0 15.5023    
cufflinks 11.1727 0.0 58.0619    
cufflinks 57.2992 0.0 251.913 High High
cufflinks 2.71198 0.0 13.8133    
cufflinks 2.17506 0.0 14.6207    
cufflinks 0.128        
cufflinks 0.113        
cufflinks 0.217       High
cufflinks 0.1        
cufflinks 0.065     Low  
cufflinks 0.04     Low Low
cufflinks 0.09     Low  
cufflinks 0.123        
cufflinks 0.392       High
cufflinks 0.124        
cufflinks 0.071     Low  
cufflinks 0.089        
cufflinks 0.081     Low  
cufflinks 0.051     Low Low
cufflinks 0.129        
cufflinks 0.065     Low  
cufflinks 0.077        

0 Strain